ggKbase home page

NECEvent2014_8_1_scaffold_114_8

Organism: NECEvent2014_8_1_Enterococcus_faecalis_rel_37_13

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 ASCG 14 / 38
Location: comp(6923..7489)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 30 subunit, SigH n=238 Tax=Enterococcus RepID=D4MG70_9ENTE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 376
  • Evalue 2.10e-101
  • rbh
sig3.4; Sigma-70 factor family protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 376
  • Evalue 5.90e-102
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EFM83325.1}; TaxID=749495 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 376
  • Evalue 2.90e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Enterococcus faecalis → Enterococcus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 567
ATGTTAGAACAGATTCAACAAGCATTAGCAGGAGACCAAGAACAATTTCAAGCCTTATATGGGCAATATCAGCCAGTGATTTATAAGTGCATGAAAAAATACTATTTAAAAGATTATGATACTGAAGACTGGCTTCAAGAAGGACGAATTGTCTTCTTTCGGACGTTAGAACGATTTGATTCAGAAAAACAAGCATCATTAGGAAAGTTTTTTAAACGAAATTTTGAAAATCACGTACATAGCTTAATTCGCCATCAATGCGCCTATAAGCGGCGAACAGATACCTTGTCTATTTCTCTGGAACAACGATTAGAAAGCGCTGGTGAAGAGTTAGTGGACTATTTAGGGACAGCGGCTACCGACCCATTAGGTCAATTAATGATTCAAGAAAAATTGGCAGCTTTTCCGACACGTCTTTCCTCGTTGGAACAACAAATTTTAAACGCATACTTAAAAGGCTACACGTTAGAAGAAATCGCTAAAGTGCGTGGGGGAACTTTTTCAGCTGTCCGAAGTGCCTATGATCGTGCCAAAGCAAAAATGAAATATACATTAGAAAATGAATAA
PROTEIN sequence
Length: 189
MLEQIQQALAGDQEQFQALYGQYQPVIYKCMKKYYLKDYDTEDWLQEGRIVFFRTLERFDSEKQASLGKFFKRNFENHVHSLIRHQCAYKRRTDTLSISLEQRLESAGEELVDYLGTAATDPLGQLMIQEKLAAFPTRLSSLEQQILNAYLKGYTLEEIAKVRGGTFSAVRSAYDRAKAKMKYTLENE*