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NECEvent2014_8_1_scaffold_2979_1

Organism: NECEvent2014_8_1_Streptococcus_41_4_partial

partial RP 31 / 55 MC: 3 BSCG 31 / 51 ASCG 6 / 38
Location: 3..1562

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1340485 species="Bacteria; F similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 519.0
  • Bit_score: 993
  • Evalue 8.20e-287
Transcription-repair-coupling factor n=1 Tax=Streptococcus mitis 18/56 RepID=S7Z2P0_STRMT similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 519.0
  • Bit_score: 993
  • Evalue 5.90e-287
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 519.0
  • Bit_score: 976
  • Evalue 3.60e-282

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Taxonomy

Streptococcus mitis → Streptococcus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1560
GTTGCTATGCGTGCAGCCTTTAAGGCAGTCAATGATCACAAACAGGTTGTCGTTCTAGTTCCGACGACGGTTTTAGCGCAACAGCACTATACGAATTTTAAGGAACGATTCCAAAATTTTGCAGTTAATATTGATGTGTTGAGTCGCTTTAGAAGTAAAAAAGAGCAGACTGAAACACTTGAAAAATTGAAAAAGGGTCAAGTTGATATTTTAATTGGAACACATCGTGTTTTGTCAAAAGATGTTGTATTTGCTGATTTGGGCTTGATGATTATTGATGAGGAACAGCGATTTGGTGTCAAGCATAAGGAAACCTTGAAAGAACTGAAAAAACAAGTAGATGTCCTGACCTTGACAGCAACGCCAATTCCTCGTACCCTTCATATGTCTATGCTGGGAATCAGAGATTTGTCTGTTATTGAAACTCCTCCAACAAATCGCTATCCTGTTCAAACCTATGTTTTGGAAAAGAATGATAGTGTCATTCGTGATGCGGTCTTGCGTGAAATGGAGCGTGGAGGTCAAGTTTACTATCTTTACAACAAAGTTGACACGATTGACCAGAAGGTTTCAGAATTACAGGAGTTGATTCCAGAGGCTTCGATTGGTTATGTTCATGGGCAAATGAGTGAGATTCAGTTAGAAAATACTCTACTGGATTTCATTGAAGGTCAGTATGATATTTTGGTGACAACTACCATTATTGAGACAGGGGTGGACATTCCAAATGCCAATACTTTATTTATTGAAAATGCGGACCATATGGGCTTGTCAACTTTGTATCAGTTAAGAGGAAGAGTCGGTCGTAGTAATCGTATTGCTTATGCCTATCTCATGTATCGTCCAGAAAAATCAATCAGTGAAGTCTCCGAGAAGAGATTAGAAGCGATTAAAGGATTTACAGAATTGGGCTCTGGATTTAAGATTGCAATGCGAGATCTTTCGATTCGCGGAGCAGGAAATCTTTTAGGAAAATCCCAGTCTGGTTTCATTGATTCTGTTGGTTTTGAATTGTATTCGCAGTTACTAGAGGAAGCTATTGCTAAACGACATGGTAATGGGAACACAAGAACCAAAGGGAATTCTGAGTTGATTTTGCAAATTGATGCCTATCTTCCTGATACTTATATTTCAGACCAACGACATAAGGTTGAAATTTATAAAAAAATTCGTCAAATTGACAACCGTGTCAATTATGAGGAGTTACAAGAAGAGCTGATGGACCGTTTTGGAGAATACCCAGATGTTGTTGCCTATCTTTTAGAGATTGGTTTAGTCAAGTCATATTTGGACAAGGTCTTTGTAGAACGTGTGGAAAGAAAAGAAAATAAGATTACAGTTCAATTTGAAAAAATTACTCAGCGGCTGTTCTTGGTTCAAGATTATTTTAAAGCTTTATCCGCAACGAACTTAAAAGCAGCTATAGCTGAGAATAAGGGATTAATGGAAGTTGTATTTGATGTTCGAAACAAGAAGGACTATGAAATTTTAGAAGGTCTGCTCATTTTTGGAGAAAGTTTATTAGAGATAAAAGTGTCGAAAGGAGGCAATTCCCTTTAA
PROTEIN sequence
Length: 520
VAMRAAFKAVNDHKQVVVLVPTTVLAQQHYTNFKERFQNFAVNIDVLSRFRSKKEQTETLEKLKKGQVDILIGTHRVLSKDVVFADLGLMIIDEEQRFGVKHKETLKELKKQVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLEKNDSVIRDAVLREMERGGQVYYLYNKVDTIDQKVSELQELIPEASIGYVHGQMSEIQLENTLLDFIEGQYDILVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRPEKSISEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNLLGKSQSGFIDSVGFELYSQLLEEAIAKRHGNGNTRTKGNSELILQIDAYLPDTYISDQRHKVEIYKKIRQIDNRVNYEELQEELMDRFGEYPDVVAYLLEIGLVKSYLDKVFVERVERKENKITVQFEKITQRLFLVQDYFKALSATNLKAAIAENKGLMEVVFDVRNKKDYEILEGLLIFGESLLEIKVSKGGNSL*