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NECEvent2014_8_1_scaffold_3787_1

Organism: NECEvent2014_8_1_Clostridium_perfringens-rel_30_12

near complete RP 47 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 2..157

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V263_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 51.0
  • Bit_score: 102
  • Evalue 1.60e-19
sigV; RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 51.0
  • Bit_score: 102
  • Evalue 4.50e-20
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EIA18290.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262 similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 51.0
  • Bit_score: 102
  • Evalue 2.20e-19

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 156
TATAAAACAGTAATAATCATGATGTACTTTAATGATATGAAAATAAAAGATATTTCAAAGGTTATGGAAACTCCAGAAAACACAGTTAAAACTTATTTGAGAAGAGCAAAACAAGCTTTAGGTGAGGTTTTAAAGGAGGGCTATTTAAATGAATAA
PROTEIN sequence
Length: 52
YKTVIIMMYFNDMKIKDISKVMETPENTVKTYLRRAKQALGEVLKEGYLNE*