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NECEvent2014_8_1_scaffold_512_2

Organism: NECEvent2014_8_1_Klebsiella_pneumoniae-rel_58_13_partial

partial RP 26 / 55 MC: 3 BSCG 25 / 51 ASCG 11 / 38 MC: 2
Location: comp(818..1027)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock-like protein CspC n=2241 Tax=Bacteria RepID=CSPC_ECO57 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 143
  • Evalue 8.50e-32
cspC; stress , member of the CspA stress protein, member of the CspA family predicted DNA-binding transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 143
  • Evalue 2.40e-32
Conserved domain protein {ECO:0000313|EMBL:EGI45480.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 143
  • Evalue 1.20e-31

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGGCAAAGATTAAAGGTCAAGTTAAGTGGTTCAACGAGTCTAAAGGTTTTGGTTTCATTACTCCGGCTGATGGCAGCAAAGACGTGTTCGTACACTTCTCCGCTATCCAGGGTAACGGCTTCAAAACTCTGGCTGAAGGCCAGAACGTTGAGTTCGAAATTCAGGACGGCCAGAAAGGTCCGGCTGCAGTTAACGTAACTGCTATCTGA
PROTEIN sequence
Length: 70
MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNVTAI*