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NECEvent2014_8_3_scaffold_244_15

Organism: NECEvent2014_8_3_Clostridium_perfringens_28_18

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(20005..20475)

Top 3 Functional Annotations

Value Algorithm Source
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 156.0
  • Bit_score: 307
  • Evalue 1.60e-81
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Clostridium perfringens RepID=B1BMR6_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 156.0
  • Bit_score: 308
  • Evalue 4.50e-81
  • rbh
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 156.0
  • Bit_score: 308
  • Evalue 6.20e-81

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 471
ATGAGAATAGGAATGGGATATGATGTTCATAAATTAGTTGAAAATAGAGATTTAATATTAGGTGGAGTAAAAATTCCTTATGAAAAAGGACTTTTAGGCCATTCAGATGCTGATGTATTATTACACGCAATAATGGATTCACTTTTAGGAGCAGCGGCTTTAGGAGATATAGGAAAGCATTTTCCAGATACAGACCCTAATTACAAAGGTGCTGATAGCATAAAACTTCTAGAATTTGTAGGTGAACTTTTAAATAAAAATAACTATAAAATATCAAATATAGATGCAACTATAATAGCTCAAAGACCAAAAATGGCCCCTCATATACCTACTATTAGAGAAAATATAGCTAAAGCATTAAATATAGACTTAGATCAAATAAATGTTAAAGCAACTACTGAGGAAGGACTTGGTTTTACTGGTTCTGGAGAAGGAATCTCATCTCAAAGTATTTGTCTTTTAATAAAATAA
PROTEIN sequence
Length: 157
MRIGMGYDVHKLVENRDLILGGVKIPYEKGLLGHSDADVLLHAIMDSLLGAAALGDIGKHFPDTDPNYKGADSIKLLEFVGELLNKNNYKISNIDATIIAQRPKMAPHIPTIRENIAKALNIDLDQINVKATTEEGLGFTGSGEGISSQSICLLIK*