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NECEvent2014_8_3_scaffold_4532_1

Organism: NECEvent2014_8_3_Clostridium_perfringens_28_18

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 308..901

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BM49_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 197.0
  • Bit_score: 394
  • Evalue 7.80e-107
  • rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDS79074.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 197.0
  • Bit_score: 394
  • Evalue 1.10e-106
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 190.0
  • Bit_score: 188
  • Evalue 2.40e-45

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 594
ATGAATAAGGAAATGGTTGATTTTTTATTAATAGAGGGGAAAAAGGGAAATAAGGAAGCCATGGAAAAGCTTTTTGAGATTCACAAAGGATTGATTTATAAGTATTCAACTAAGTATTTCATAAAGGGATATGATAGGGAGGACTTAGAGCAGATAGGGTGGATTGAGTTTATGAATGGGGTTAAGAAGTATGATGGAAGCTTTGGAATAGATTTTGTAGCTTTTATAACCATTCTTTTGAGAAATAAATATGGCTGCATGCTAAAAAGAAAGGAGGTTGACATGAAATTTTCAAGCTTAGACACACCAATTGGGGAGGATATAACAATGAAGGATACCTTAGAGGATGATTTTTCCATGGAAAATGACTTTGAGCATAGAGAGGAAATGGAGGCACTATTAAATGCTATTAGTAACTTGGAGGATGAGGAAAGGGAATTTATTCTCTATATCAATGAGGAGAGAGGAAATATGCAAAAGTATTATGAGCAACATAAGAATGAAATGACCTTTAATGCTGTTAGATATAAAAAGAAAAAGATTATGGACAAGATTCAAAAAGCTCTTAAGAAGAAGGGAATAAAGGGAAATTAG
PROTEIN sequence
Length: 198
MNKEMVDFLLIEGKKGNKEAMEKLFEIHKGLIYKYSTKYFIKGYDREDLEQIGWIEFMNGVKKYDGSFGIDFVAFITILLRNKYGCMLKRKEVDMKFSSLDTPIGEDITMKDTLEDDFSMENDFEHREEMEALLNAISNLEDEEREFILYINEERGNMQKYYEQHKNEMTFNAVRYKKKKIMDKIQKALKKKGIKGN*