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NECEvent2014_8_3_scaffold_259_12

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(14027..14512)

Top 3 Functional Annotations

Value Algorithm Source
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 161.0
  • Bit_score: 294
  • Evalue 1.50e-77
3-isopropylmalate dehydratase small subunit {ECO:0000255|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01032}; Short=IPMI {ECO:00 similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 161.0
  • Bit_score: 294
  • Evalue 7.40e-77
3-isopropylmalate dehydratase small subunit n=2 Tax=Clostridium botulinum B RepID=LEUD_CLOBB similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 161.0
  • Bit_score: 294
  • Evalue 5.30e-77

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 486
ATGAAAGTAACAGGAAAAGTTTTTAAGTATGGCGATAATGTAGATACAGATGTAATAATTCCAGCAAGATATTTAAATACTTCAGTGCATAAAGAACTTGCTGCACACTGTATGGAAGATATAGATAAAGAGTTTGTTAAGAATGTGGAAGATGGAGATTTTATTGTAGCAAATAAAAATTTTGGTTGTGGATCTTCACGAGAACATGCACCTATAGCTATAAAGGCAGCAGGGGTTAGCTGTGTAATAGCTTCAACTTTTGCAAGAATATTCTACAGAAATGCCATTAATATAGGATTACCTATTTTAGAATGTGATGAGGCTGTTAAGGCAATAGATAATGGAGATAAGCTAGAGGTTGACTTCTCTACAGGAGTAATTAAAAACCTAACTAAGAATGAAGAATATAAGGGAGAACCATTCCCAGAGTTTATGCAAAATATAATAGATAATGACGGATTAATTGGATATATAAGAAATAAATAA
PROTEIN sequence
Length: 162
MKVTGKVFKYGDNVDTDVIIPARYLNTSVHKELAAHCMEDIDKEFVKNVEDGDFIVANKNFGCGSSREHAPIAIKAAGVSCVIASTFARIFYRNAINIGLPILECDEAVKAIDNGDKLEVDFSTGVIKNLTKNEEYKGEPFPEFMQNIIDNDGLIGYIRNK*