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NECEvent2014_8_3_scaffold_966_6

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 4406..5041

Top 3 Functional Annotations

Value Algorithm Source
Putative TetR family transcriptional regulator n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SBM9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 211.0
  • Bit_score: 417
  • Evalue 7.10e-114
  • rbh
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:CDC58563.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 211.0
  • Bit_score: 417
  • Evalue 9.90e-114
putative TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 212.0
  • Bit_score: 211
  • Evalue 2.80e-52

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Taxonomy

Dorea formicigenerans CAG:28 → Dorea → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 636
ATGGCACGAAATAAATATCCAGAAGAAACAGTAAAACTCATTTTAGATGTTTCTACAAAAATGTTTTGTGAAAAAGGATACGATAACACATCATTGCAAGATATTATCAATGAAACAAAACTTTCTAAAGGTGCTATTTATCATCATTTCGATTCAAAGGAAGATATTTTAAAAGCAATTTTTCAAAGAATTGGAAATGAAAATGCAGTAATATTTGCTAAAATTAGAGATAACGATAGTTTAAACGGTTTAGAAAAGTTAAGAGAAATATTTAAGACAGCGGTATTCAATTCTAACCAAAGCGTTTTATTGACAGTTTCTCCTCAACTATTAAACAATCCTCGTTTTCTTGCTATGCAAATAGAACAAATGTATGAAATTGTAGTACCTGAATTTGTTGAACCCGTTTTAGAACAAGGTATCAAGGATAAGTCTTTGGAGATTGAAAATTCACATGAAATTGCAGAAGTTATCATGGTATTAAGTAATGTATGGCTCAACCCATTAGTTGAAATGACGGATAAAGAGGGTATGGAAAAACGTTGCAATACATTCAATGCCCTTTTAAATGGAATAGGCATAGACACATTATTAGACGAAGAAACAATTTCTGCATTTATACAGTTTTGTAAATAA
PROTEIN sequence
Length: 212
MARNKYPEETVKLILDVSTKMFCEKGYDNTSLQDIINETKLSKGAIYHHFDSKEDILKAIFQRIGNENAVIFAKIRDNDSLNGLEKLREIFKTAVFNSNQSVLLTVSPQLLNNPRFLAMQIEQMYEIVVPEFVEPVLEQGIKDKSLEIENSHEIAEVIMVLSNVWLNPLVEMTDKEGMEKRCNTFNALLNGIGIDTLLDEETISAFIQFCK*