ggKbase home page

NECEvent2014_8_3_scaffold_1295_1

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 2..1399

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan-binding protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FXT8_CLOPA similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 465.0
  • Bit_score: 603
  • Evalue 2.00e-169
Peptidoglycan-binding protein {ECO:0000313|EMBL:ETD69089.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRR similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 465.0
  • Bit_score: 603
  • Evalue 2.80e-169
peptidoglycan-binding LysM similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 465.0
  • Bit_score: 602
  • Evalue 1.30e-169

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium pasteurianum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1398
GTTTTAGGGGATAAAGTCATGGTGGAAGGTAAGGTGGAATATTCAGTACTTTACATTCCGAGAGAAGATAATATGATGGTTAATTCTGTGAGCTATGCTGAGAAGTTTACTAATTACTTGGACCTTGATGAAGGAGAACATAAAGTTATTTGTGAAGTAGAATGCAAGGTAGAACATATTGATGCTAATATTATGAATGAAAGAAAGATAGCTATTGAAGGTGTTATTGACCTAGACTGGAAAGTTTATAAAAGTATTGAGTTTGATTTTGTAAAAGACATAGAAGGTACTGAAGGTGTAGAAGTATTAAAAAATACAGAATCGATCAACAGGTTAGTAAGTAGCAAAGAGGTTGACCTTATAGGAAAATCAGTTCTAAGAGTTGGCATGGATAAACCACAAGTTTCAAAAATCCTTAAATGTTCTATGACCCTTCATAAAAGAGAGGTTAAAGTTGCAGAAGATAAGGTTTATTTAGGATGTTACTGTAAGTTAAACATATTATATTTAGGTGCTGATTCTAAAGAAATAGTAAGCCTACAAGATGATGTGTACCTTTCAAAAGAAGAAGAAATGGTTGGTGTACTATCTAATATGTTACCATCAGCTATTTATGAAATAAAGAATACTGATATAGGTCTAGAAGAAGATGACCTAGGCGAAACTAGAATAATGAATATTGAATTTTTGGTAAAATGTAGCATTAAGGTATTCTCTGATGAAGTATTAGAAATAATTAAAGACGCTTACTCTCCAAAATTCCCATTAGAACTTAGAAAAGATAGCTATGAAATAGGAGTTATTCATGGGTCTCAAGCTACAGAGGCTATAATAAAGGATAATATTACAGTAAAGGAAGGTGATTATAAGCCTGAATTTATTGTGGGAGCAACAGGAAGTATAATAGTTACAGACAAAAAAGTTACAGATGATAAGGTTACAGTAGAAGGCGTAATTAAGGCTAATGTTATATATAAGACAACAGATGAAGAGGTTGGCTATTCACAAATAAGTGGTGATATACCATTTACTGTTGTATTAGATATTAATGGAGCTAAAGAAGGTATGAAAGCAATAGTTAATAGTAATCTAGAAGCTATTGATGCATCTATAGAAGCCAATACAGTTGCCGTTAAAGCTACAATATCTGTAGGGGCTAAACTTTCCTATGAAGTAAATAAAGAATTTATTTCTGATGTAATTGAATTAGATGAAGAACCTAAAAAGAAAAAGGCTAGTATTACTATATATGTTGTTACAAAGGGAGATACTTTGTGGTCATTAGCAAAAAAATATAATACAACTGTGGATGCTATAGTTAAGATGAATTCCATAGAAAATCCAGACAGTATTGAAATTGGAGATAAGTTAATAATACCTGGACGAGCAATTTTTTAA
PROTEIN sequence
Length: 466
VLGDKVMVEGKVEYSVLYIPREDNMMVNSVSYAEKFTNYLDLDEGEHKVICEVECKVEHIDANIMNERKIAIEGVIDLDWKVYKSIEFDFVKDIEGTEGVEVLKNTESINRLVSSKEVDLIGKSVLRVGMDKPQVSKILKCSMTLHKREVKVAEDKVYLGCYCKLNILYLGADSKEIVSLQDDVYLSKEEEMVGVLSNMLPSAIYEIKNTDIGLEEDDLGETRIMNIEFLVKCSIKVFSDEVLEIIKDAYSPKFPLELRKDSYEIGVIHGSQATEAIIKDNITVKEGDYKPEFIVGATGSIIVTDKKVTDDKVTVEGVIKANVIYKTTDEEVGYSQISGDIPFTVVLDINGAKEGMKAIVNSNLEAIDASIEANTVAVKATISVGAKLSYEVNKEFISDVIELDEEPKKKKASITIYVVTKGDTLWSLAKKYNTTVDAIVKMNSIENPDSIEIGDKLIIPGRAIF*