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NECEvent2014_8_3_scaffold_1313_6

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(2629..3861)

Top 3 Functional Annotations

Value Algorithm Source
glyA; serine hydroxymethyltransferase (EC:2.1.2.1) similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 410.0
  • Bit_score: 708
  • Evalue 1.40e-201
Serine hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000255|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000255|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000255|HAM similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 410.0
  • Bit_score: 708
  • Evalue 7.10e-201
serine hydroxymethyltransferase n=1 Tax=Clostridium botulinum RepID=UPI00037F47A0 similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 410.0
  • Bit_score: 709
  • Evalue 1.70e-201
  • rbh

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1233
ATGAATTTTGATAATGTAAAAAAGGTAGATGAAGAAGTTTATGCTCTTATGGAAAAAGAGTTAAACAGACAACAAAAAGGTATAGAACTTATTGCATCTGAAAACTTTGCTAGTGAAGCTGTTATGGAAGCAATGGGATCATACTTAACAAATAAGTACGCAGAAGGATATCCAGGAAAGAGATATTATGGGGGCTGCTACGTTGTTGATGAAATTGAAGATATAGCTAGAAATAGAGCTAAGGAACTTTTTGGAGCTGAGCATGCAAATGTTCAACCTCATGCAGGTTCACAAGCTAATATGGCTGTATATTTCACAATTTTAAAACCTGGGGACACTGTTTTAGGGATGGACTTAAGTCATGGTGGACATTTAACTCATGGATCACCAGTTAATTTTTCAGGAAGATTATTTAACTTCGTATCATATGGCGTTGATAAGGAAACTGAAAGAATTAATTATGATGAAGTAAGAAAAATTGCATTAGAATGTAAGCCAAAACTAATTGTAGCTGGTGCGAGTGCTTATGCAAGAATAATTGATTTTAAAAAGTTTAGAGAAATTGCAGATGAAGTTGGTGCATATTTCATGGTTGATATGGCTCATATTGCAGGGTTAGTTGCTGCAGGGTTACATCCATCACCAGTACCATATGCTGACTTTGTAACATCTACAACTCATAAAACTTTAAGAGGACCAAGGGGAGGATTAATCCTTTGCAAAGAAAAGTATGCTAAGGATTTAGATAAAAATATATTCCCAGGAATGCAAGGTGGACCTTTAATGCATGTTATTGCTGGTAAAGCAGTATGCTTTAAGGAAGCTTTAGATCCTAGCTTTAAGAAATATATGACAAAAGTAGTAAATAACTGTAGAGTTTTAGGGGAAGAACTTGTAAATAGAGGATTTAAATTAGTTTCTGATGGAACTGACAACCACCTAATCCTTGTTGATTTAAACAATAAGGATGTAACAGGAAAAGAAGTTGAAAATCTTTTAGATACAATTGGAGTTACTGTTAATAAAAATACAGTGCCAAATGAAACTAGAAGCCCATTTGTAACATCAGGTATTAGAATTGGTACTGCAGCAGTTACTACTAGAGGCTTTGAAGAAGAAGATATGAAAGTTATTGCTGAAATAATTGATGAGGCAATACAAAATAGAGAGGGAGATCTGTCTACTTTAAGAGAAAAGGTTGAAGCTCTTTGTGACAAACATCCATTATACTAG
PROTEIN sequence
Length: 411
MNFDNVKKVDEEVYALMEKELNRQQKGIELIASENFASEAVMEAMGSYLTNKYAEGYPGKRYYGGCYVVDEIEDIARNRAKELFGAEHANVQPHAGSQANMAVYFTILKPGDTVLGMDLSHGGHLTHGSPVNFSGRLFNFVSYGVDKETERINYDEVRKIALECKPKLIVAGASAYARIIDFKKFREIADEVGAYFMVDMAHIAGLVAAGLHPSPVPYADFVTSTTHKTLRGPRGGLILCKEKYAKDLDKNIFPGMQGGPLMHVIAGKAVCFKEALDPSFKKYMTKVVNNCRVLGEELVNRGFKLVSDGTDNHLILVDLNNKDVTGKEVENLLDTIGVTVNKNTVPNETRSPFVTSGIRIGTAAVTTRGFEEEDMKVIAEIIDEAIQNREGDLSTLREKVEALCDKHPLY*