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NECEvent2014_8_3_scaffold_2324_4

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(2588..2818)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Clostridium tetani 12124569 RepID=U6EX69_CLOTA similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 76.0
  • Bit_score: 150
  • Evalue 5.80e-34
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 76.0
  • Bit_score: 150
  • Evalue 1.60e-34
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyr similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 76.0
  • Bit_score: 150
  • Evalue 8.10e-34

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Taxonomy

Clostridium tyrobutyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 231
TTTACTATGCTAAAAGAACAATTAATAAATGTTCTAGATACTTTAACTCCAAGAGAAGAAAAAGTATTAAGACTAAGATTTGGTCTTGATGATGGTAGAGCAAGAACTCTTGAAGAAGTAGGTAAAGAGTTCAATGTAACAAGAGAAAGAATAAGACAGATAGAAGCTAAAGCTTTAAGAAAGCTTAGACACCCATCAAGAAGTAAAAAGCTTAAGGATTATTTAGATTAA
PROTEIN sequence
Length: 77
FTMLKEQLINVLDTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLKDYLD*