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NECEvent2014_8_3_scaffold_2571_4

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 1874..2479

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 206.0
  • Bit_score: 308
  • Evalue 8.10e-81
Pseudouridine synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F9M4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 206.0
  • Bit_score: 308
  • Evalue 5.70e-81
rluB; ribosomal large subunit pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 202.0
  • Bit_score: 299
  • Evalue 9.90e-79

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Taxonomy

Clostridium chauvoei → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 606
ATGGAAGAAAGATTACAGAAGTACATGGCAAGATGTGGTGTTGCATCTAGAAGAAAATGCGAAGAAATTATTTTAGGTGGAAAAGTAAAGGTTAATGGAGAGATAATTAATGAACTTGGTACTAAGGTTAATCCAGATATAGATAAAGTAGAAATTGAAGAAAAGATTATTTTGCCAGAAGAAAACAAGGTTTACATATTACTAAATAAGCCAGAAGGCTATATAACATCAGTTAAGGATGAGAAGGATAGGAAAACTGTTATTGATTTAGTTAATGTTAAGGAAAGAATTTATCCAGTAGGTAGATTAGATTATGATAGTTCAGGTTTAATTATTTTAACTAACGATGGTGATCTTTATAATAAAATAATGCATCCAAGAGTTAAAGTAGTTAAAAGATATATAGCAGTGTGTACGGGAGAGTTTACACCTAGAGAGCTTGATAAGTTTAGAAAAGGAATAGATATTGGAGGATATATTACTGCAGATGCTAATATTAAAGTTATTAAGGTTGAAGATGGGAAGAGTACAGTAGAAATTGGAATTCATGAAGGTAAGAACAGACAAATTAGAAGAATGTGTTCTGCTTTAGGTCATGATGTACTG
PROTEIN sequence
Length: 202
MEERLQKYMARCGVASRRKCEEIILGGKVKVNGEIINELGTKVNPDIDKVEIEEKIILPEENKVYILLNKPEGYITSVKDEKDRKTVIDLVNVKERIYPVGRLDYDSSGLIILTNDGDLYNKIMHPRVKVVKRYIAVCTGEFTPRELDKFRKGIDIGGYITADANIKVIKVEDGKSTVEIGIHEGKNRQIRRMCSALGHDVL