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NECEvent2014_8_3_scaffold_4224_1

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 1..1269

Top 3 Functional Annotations

Value Algorithm Source
lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-) similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 423.0
  • Bit_score: 666
  • Evalue 4.90e-189
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H825_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 423.0
  • Bit_score: 668
  • Evalue 6.00e-189
ABC transporter {ECO:0000313|EMBL:KEZ87303.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 423.0
  • Bit_score: 683
  • Evalue 1.90e-193

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Taxonomy

Clostridium sulfidigenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1269
AATAGTTATGGAGATGTATTAAGCAGAATAACTAATGACATAGACACAATATCTAATGCCCTTCAACAAAGTTTTGTGCAAGTTGTTAATTCATTTTTATCAATTACCCTTGCACTTATAATGATGTTTACTATAAATATAAAAATGGCATTTATAGCTGTTTTTATAATTCCGTTAAGTATATTAGTATCAAGATTTATTGTAAGTAAATCACAAAATCTATTTTATAGACAGCAGAAGGCACTGGGAAAATTAAATGGTAAAGTACAAGAAATGTATACTGGTTTTAATGAAATAAAGCTTTATGGAAAGCAAGAAGATTCTATAAAAGAGTTTATGGAAACCAATGATGAACTTTGTAGAACTGGATTTAAAGCACAGTTTATATCAAGCACAATGTCTCCACTTGTTTCATTAGTTAGTTATATTGGAATTGCTATAATAGGAGCAATAGGAGCTATAGATGCAATTAGAGGAATAATTACTACAGGAAACTTACAAGCTTTCATAAGATATATATGGCAAATAAACCAACCTTTATCGCAAGTAACTCAATTATCTTCTGCTATGCAATCAGCTGTAGCAGCTATGGAAAGAGTAATAGAAATCTTAGATGAGGAAGAACAAATAAAAGATAAAGTAGATTCAATAACACTAAAGGATCCAAAGGGAAATGTAACCTTTGATCATGTTAAATTTGGCTACTTTGAAGATAAAACTCTTATTAAAGATTTGAATGTAGATATAAAAAGTGGTCAGATGGTTGCAATAGTTGGACCAACTGGTGCAGGAAAAACAACAATTATCAATCTACTAATGAGATTTTATGAGATTCAAGGAGGAGCTATTAAAATTGATGGCGTAGATATTAGAGATATAAAGCGTGAAGAGCTAAGAAAGATGTTTGGAATGGTACTCCAAGATACATGGCTTTATAAAGGCACAATAAAAGATAATATTAGATATGGAAGATTTGATGCAAGTGATGAAGAAGTTATAAATGCAGCAAAAGTTGCAAATGTACATCATTTTATTAAAACCCTACCAGATGGATATGATATGATTCTGAATGAAGAAGCTTCAAACATATCTCAGGGTGAGAAACAATTACTTACTATTGCTAGAGCAATATTAGCTGACCCTGCCATTTTAATACTTGATGAAGCTACTAGTTCAGTAGATACAAGATTAGAACTTATGATTCAAAATGCAATGAAAAACGTAATGAGCGGTAGAACAAGTTTTGTAATTGCTCATAGATTATCTACA
PROTEIN sequence
Length: 423
NSYGDVLSRITNDIDTISNALQQSFVQVVNSFLSITLALIMMFTINIKMAFIAVFIIPLSILVSRFIVSKSQNLFYRQQKALGKLNGKVQEMYTGFNEIKLYGKQEDSIKEFMETNDELCRTGFKAQFISSTMSPLVSLVSYIGIAIIGAIGAIDAIRGIITTGNLQAFIRYIWQINQPLSQVTQLSSAMQSAVAAMERVIEILDEEEQIKDKVDSITLKDPKGNVTFDHVKFGYFEDKTLIKDLNVDIKSGQMVAIVGPTGAGKTTIINLLMRFYEIQGGAIKIDGVDIRDIKREELRKMFGMVLQDTWLYKGTIKDNIRYGRFDASDEEVINAAKVANVHHFIKTLPDGYDMILNEEASNISQGEKQLLTIARAILADPAILILDEATSSVDTRLELMIQNAMKNVMSGRTSFVIAHRLST