ggKbase home page

NECEvent2014_8_4_scaffold_3978_2

Organism: NECEvent2014_8_4_Clostridium_perfringens_30_8

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 1053..1544

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 164.0
  • Bit_score: 331
  • Evalue 7.20e-88
Pseudouridine synthase n=4 Tax=Clostridium perfringens RepID=Q0TRF8_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 164.0
  • Bit_score: 331
  • Evalue 5.10e-88
  • rbh
rluB; ribosomal small subunit pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 164.0
  • Bit_score: 331
  • Evalue 1.50e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 492
ATGGAAGAAAGATTGCAAAAATACATGGCAAGGTGTGGAGTAGCATCAAGAAGAAAATGTGAAGAAATAATTTGCAGTGGAAAAGTAAAGGTTAATGACATTGTTGTTGACTCCCTTGGGACTAAGGTTGATCCATCAGTAGATGTTGTTAGCGTTAATAATAAAGTAATTCGTCCTGAGGAGAATAAAGTATATATAATGCTAAATAAGCCTGAAGGATATGTTACAACAAATAAAGATGAAAAAAATAGAAAGACCATATTAGATATAGTAAAGGTGAATGAGAGAATATATCCTATAGGACGTCTTGACTATGACAGTTCAGGATTACTTTTATTAACTAATGATGGAGATGTATACAATAAGATAATACATCCAAGAGTTAATTTAAATAAAGAATATATTGCCTTAGTAAAAGGAATTTTTACAGAGGAAGAAATGAATAAATTTAGAAAAGGCGTAGATATAGGAGATTATAAAACAGCAGAGTGT
PROTEIN sequence
Length: 164
MEERLQKYMARCGVASRRKCEEIICSGKVKVNDIVVDSLGTKVDPSVDVVSVNNKVIRPEENKVYIMLNKPEGYVTTNKDEKNRKTILDIVKVNERIYPIGRLDYDSSGLLLLTNDGDVYNKIIHPRVNLNKEYIALVKGIFTEEEMNKFRKGVDIGDYKTAEC