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NECEvent2014_8_4_scaffold_4919_1

Organism: NECEvent2014_8_4_Clostridium_perfringens_30_8

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 1..765

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 254.0
  • Bit_score: 398
  • Evalue 9.80e-108
Pseudouridine synthase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3B9_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 254.0
  • Bit_score: 398
  • Evalue 7.00e-108
  • rbh
RNA pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 254.0
  • Bit_score: 396
  • Evalue 5.70e-108

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 765
AAACAAAAAGTAGCTAAAAAGGCTTCAGTAAAAAATACTATTATAGTATCAAATAAAAATGAAATAAGAGATAAAGTTAGATTAAATAAATATATAAGTGAAACAGGATTTTGCTCAAGGAGAGAGGCTGATAAGCTTATAGAACAAGGAAGAGTTAAGATAGATGGGCTAAAGGCTACAACTGGTATGAAGGTTTCTAAGGGGCAAAGTGTATCTATTGATGGAAAACCTCTAAAGGTTGAAAATGAACTAGTTTATATAGCTTTAAATAAGCCTGTTGGAATAACTTGTACTACTGAGAGCAAGATAAAAGGTAATATAGTTGACTTTATAAATCATGAAAAAAGAATTTTCCCAATAGGAAGACTAGATAAGGACTCTCAAGGATTAATAATTTTAACTAATGATGGAGATTTAGCAAATGAAGTTTTAGCAGCAGAAAATAACCATGAAAAGGAATATATAGTAACCTTAGATCAACCTTTTTATGATGATTTTATTGAAAAAATGGAGCGTGGTGTTGAAATATTAGGACAAGTAACAAAACCTTGTAAACTAAAGAGAATAAATGAAAATACCTATTCAATAATATTAACTCAAGGGTTAAATAGACAAATAAGAAGAATGAGTAAGGTTTTTGGCTTTAATGTAGTTAAGTTAGAGAGAATTAGAATTCTTAATATAACTCTTGAAGACATAGAATATGGAAAATGGAGATATATAAATAGGGAAGAAATTGAGATTTTAAAAAAACTTATAAAATAA
PROTEIN sequence
Length: 255
KQKVAKKASVKNTIIVSNKNEIRDKVRLNKYISETGFCSRREADKLIEQGRVKIDGLKATTGMKVSKGQSVSIDGKPLKVENELVYIALNKPVGITCTTESKIKGNIVDFINHEKRIFPIGRLDKDSQGLIILTNDGDLANEVLAAENNHEKEYIVTLDQPFYDDFIEKMERGVEILGQVTKPCKLKRINENTYSIILTQGLNRQIRRMSKVFGFNVVKLERIRILNITLEDIEYGKWRYINREEIEILKKLIK*