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NECEvent2014_8_4_scaffold_5013_1

Organism: NECEvent2014_8_4_Clostridium_perfringens_30_8

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(205..1179)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome-binding ATPase YchF n=10 Tax=Clostridium perfringens RepID=H7CXR1_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 324.0
  • Bit_score: 634
  • Evalue 5.60e-179
ychF; GTP-dependent nucleic acid-binding protein EngD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 324.0
  • Bit_score: 634
  • Evalue 1.60e-179
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 324.0
  • Bit_score: 634
  • Evalue 7.90e-179

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 975
GTAAGTGTACCAGATAAGAGATTAGATGTTTTAGAAAAAATATATAATACAAAGAAAAAAGTATATACTGCAATAGAGTTTTATGATATAGCAGGATTAGTTAAAGGTGCTAGTAAAGGTGAAGGATTAGGAAATAAATTCTTATCACACATAAGAGAAGTTGCAGCTATCGTTCATGTTGTAAGATGCTTTGACGATGAGAATGTTGTTCACGTAGAAGGTTCTGTAGATCCAATAAGAGATATAGAAACTATAAACTTAGAACTTATCTTTGCAGACTTAGATGTTCTTGAAAGAAGAATGGAAAAGACTATGAAGTTAGTAAGATCAGGTGATAAAACTGCTAAGTTTGAGTATGATGTAATGGAAAGATTAAAAGCTCACTTAGAAGCAAATAAACCAGCTAGAACTTTAGAAGCTACTGAAGATGAAGAAGCTTTCGTAAAAAGCTTATTCTTAATAACTTCAAAACCAGTTTTATATGCTTGTAACATATCAGAAGATGATATGATGGAAGGAAACTTAGATAATGAATATGTTCAAAAAGTTAGAGCATATGCTGAAACTGAAAATTCAGGAATCATGGTTGTTTGTGCTAAACTTGAAGAGGAATTATCAGGATTAGATGAAGAAGAAAAAGCTGAAATGTTATCTGAGTATGGATTAGAAGAATCAGGTCTTGATAAACTTATACAAGCAAGTTACAAATTATTAGGATTAATGAGTTACTTAACTGCAGGGGTACAAGAAGTTAGAGCTTGGACAATAAAACAAGGAACTAAAGCTCCACAAGCAGCAGGTAAAATTCACTCTGATATAGAAAGAGGATTCATAAGAGCTGAGGTAGTTTCTTATGACGATTTAGTAGAATGTGGTTCAGAAGCAGCTGCTAAAGAAAAAGGTGTTTACAGATTAGAAGGTAAAGAATACGTAATGAAAGATGGAGACATAGTTAACTTCAGATTCAACGTATAA
PROTEIN sequence
Length: 325
VSVPDKRLDVLEKIYNTKKKVYTAIEFYDIAGLVKGASKGEGLGNKFLSHIREVAAIVHVVRCFDDENVVHVEGSVDPIRDIETINLELIFADLDVLERRMEKTMKLVRSGDKTAKFEYDVMERLKAHLEANKPARTLEATEDEEAFVKSLFLITSKPVLYACNISEDDMMEGNLDNEYVQKVRAYAETENSGIMVVCAKLEEELSGLDEEEKAEMLSEYGLEESGLDKLIQASYKLLGLMSYLTAGVQEVRAWTIKQGTKAPQAAGKIHSDIERGFIRAEVVSYDDLVECGSEAAAKEKGVYRLEGKEYVMKDGDIVNFRFNV*