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NECEvent2014_8_4_scaffold_441_1

Organism: NECEvent2014_8_4_Clostridium_paraputrificum_31_73

near complete RP 50 / 55 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 153..857

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M1R8_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 228.0
  • Bit_score: 268
  • Evalue 5.90e-69
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EHI98313.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL- similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 228.0
  • Bit_score: 268
  • Evalue 8.20e-69
ywqC; capsular polysaccharide biosynthesis protein YwqC similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 224.0
  • Bit_score: 267
  • Evalue 3.70e-69

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Taxonomy

Clostridium sp. DL-VIII → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 705
ATGTTAAAATTTATGGAGGAAAGTAGAATGAATGAAGAAATCATCAAAATTGAAGATATAGTAGATGGGCTGAAAAAGAGATGGCAATTAATAGTTACAATAACTCTTATAGCAACAATTACATCTGCTGTTGTAAGCTTTTTTATAATAAAACCTAAATATGAAGCATCAGCAAAACTATTTGTTGGTAAGGAAGCTACAACAGAAAATTATAATAATAGTGATATAACAATGTATCAACAATTAGTAAAAACATATACAAGCCTTATAAAAACAGAGGATTTAGTTGGTAAGGCATTAAAGGATAATAATATAGATTTAGATCCTAAGATAGTAGTATCGGAATTATCTGCAGAACAAATAACAAATACTCAATTAATGCAAGTTAAATACATAAGTAAAAATAAAGAAGAAGCAGCCAATGTAGTAAAAGCAGTAACAGATGAATTTATTAAAGAATCATCAGCATTAATAAAGAATGCAGATGTAAAGATAATTGAAAGTGTAAAGCTACCTGAAAATCCAGTAAGTCCTAATAAAAAAATGAATATAGCAATAGCTATGTTACTAGGTTTAATGGTTGGAGTTGGACTAGCATTATTATTAGAGTTTATGGATAACACATTTAAGGACAAAGAGTCCTTAGAAGATATTATAGGAGTACCTGTTTTAGGTGCTATTCCAGATCAAGAAAAGGTTAAATAA
PROTEIN sequence
Length: 235
MLKFMEESRMNEEIIKIEDIVDGLKKRWQLIVTITLIATITSAVVSFFIIKPKYEASAKLFVGKEATTENYNNSDITMYQQLVKTYTSLIKTEDLVGKALKDNNIDLDPKIVVSELSAEQITNTQLMQVKYISKNKEEAANVVKAVTDEFIKESSALIKNADVKIIESVKLPENPVSPNKKMNIAIAMLLGLMVGVGLALLLEFMDNTFKDKESLEDIIGVPVLGAIPDQEKVK*