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NECEvent2014_8_4_scaffold_1757_1

Organism: NECEvent2014_8_4_Streptococcus_HSISS3-rel_41_5

near complete RP 43 / 55 MC: 2 BSCG 42 / 51 ASCG 10 / 38 MC: 3
Location: comp(3..1145)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 381.0
  • Bit_score: 761
  • Evalue 1.00e-217
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 381.0
  • Bit_score: 761
  • Evalue 5.00e-217
DNA-directed RNA polymerase subunit beta' n=1 Tax=Streptococcus salivarius PS4 RepID=I0QKS2_STRSL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 381.0
  • Bit_score: 763
  • Evalue 1.20e-217

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Taxonomy

Streptococcus sp. ACS2 → Streptococcus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1143
GTGGTTGACGTAAATCGATTTAAAAGTATGCAAATCACACTAGCTTCACCAACTAAAGTCCGTTCATGGTCTTATGGTGAAGTTAAGAAACCTGAAACAATCAACTACCGTACGCTCAAACCAGAACGTGAAGGTCTCTTTGATGAAGTGATCTTTGGTCCAACTAAGGACTGGGAATGTGCGTGTGGAAAATACAAACGTATCCGTTATAAAGGTATCGTTTGTGACCGCTGTGGTGTTGAAGTAACACGTGCTAAGGTTCGTCGTGAACGTATGGGTCACATCGAGTTGAAAGCACCAGTATCACATATCTGGTACTTCAAGGGAATCCCTTCTCGTATGGGATTGACTTTGGATATGAGCCCTCGTGCGCTTGAAGAAGTTATTTATTTCGCAGCTTACGTGGTTATCGATCCAAAAGAAACACCACTTGAACCAAAATCTCTCTTGACTGAACGTGAATATCGCGAAAAATTGCAAGAGTATGGACATGGTTCATTCGTCGCTAAAATGGGTGCAGAAGCCATCCAAGATCTCTTGAAACAAGTGGATTTGGAAGCTGAAATTGCTGAACTCAAGGAAGAGTTGAAGACAGCAACTGGTCAAAAACGTGTTAAGGCTGTTCGTCGTTTGGACGTTCTTGATGCCTTCTACAAGTCTGGTAACAAACCAGAATGGATGGTACTTAACATCTTGCCAGTATTGCCACCAGATCTTCGTCCGATGGTTCAATTGGATGGTGGCCGTTTTGCAGCATCTGACTTGAACGATCTTTATCGTCGTGTTATCAACCGTAACAACCGTTTGGCTCGTTTGCTTGAATTGAATGCCCCAGGTATCATCGTGCAAAATGAAAAACGTATGTTGCAAGAAGCGGTAGATGCCCTTATTGATAATGGACGTCGTGGTCGTCCAATCACTGGACCAGGTAGTCGTCCACTTAAATCTTTGAGCCACATGCTTAAAGGTAAACAAGGACGTTTCCGTCAGAACTTGCTTGGTAAACGTGTTGACTTCTCTGGACGTTCTGTTATCGCTGTTGGTCCAACACTTAAAATGTATCAATGTGGTGTGCCACGTTTGATGGCCATCGAACTTTTCAAACCATTTGTTATGCGTGAAATCGTTGCGCGTGAATACGCA
PROTEIN sequence
Length: 381
VVDVNRFKSMQITLASPTKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWECACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDMSPRALEEVIYFAAYVVIDPKETPLEPKSLLTEREYREKLQEYGHGSFVAKMGAEAIQDLLKQVDLEAEIAELKEELKTATGQKRVKAVRRLDVLDAFYKSGNKPEWMVLNILPVLPPDLRPMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNGRRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPRLMAIELFKPFVMREIVAREYA