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NECEvent2014_8_5_scaffold_72

Alias: 178_005_scaffold_72

Search features with annotation key words

Displaying items 31-58 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_5_scaffold_72_31
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31841..33178
DNA (1338bp) protein (446aa)
Ribosomal protein S12 methylthiotransferase RimO n=3 Tax=Clostridium butyricum RepID=B1QUW4_CLOBU
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
rimO; ribosomal protein S12 methylthiotransferase RimO
NECEvent2014_8_5_scaffold_72_32
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33162..33752
DNA (591bp) protein (197aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Clostridium botulinum E RepID=B2V4I2_CLOBA rbh
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:KIL09486.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
NECEvent2014_8_5_scaffold_72_33
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


33971..35068
DNA (1098bp) protein (366aa)
Protein recA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H316_9CLOT rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=457396 species="Bacteria; Firmicute
recA; recombinase A
NECEvent2014_8_5_scaffold_72_34
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35412..36953
DNA (1542bp) protein (514aa)
rny; ribonuclease Y (EC:3.1.-.-)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1345695 species="Bacteria; Firmicutes; Clostrid
Ribonuclease Y n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS45_CLOSA
NECEvent2014_8_5_scaffold_72_35
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37131..37391
DNA (261bp) protein (87aa)
Stage V sporulation protein S n=2 Tax=Clostridium RepID=R9CDY0_9CLOT
Putative Stage V sporulation protein S {ECO:0000313|EMBL:CDG01644.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoe
spoVS; stage V sporulation protein S
NECEvent2014_8_5_scaffold_72_36
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37519..37779
DNA (261bp) protein (87aa)
HPr family phosphocarrier n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPN2_CLOSA
ptsH; phosphocarrier protein HPr
HPr family phosphocarrier {ECO:0000313|EMBL:AGX42458.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DS
NECEvent2014_8_5_scaffold_72_37
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37814..38032)
DNA (219bp) protein (73aa)
Putative membrane protein n=2 Tax=Clostridium botulinum E RepID=B2V4I7_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71399.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_8_5_scaffold_72_38
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38206..39636
DNA (1431bp) protein (477aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SSF2_CLOPS
NECEvent2014_8_5_scaffold_72_39
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39742..41226
DNA (1485bp) protein (495aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:
Glycerol kinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDD9_9CLOT
glycerol kinase
NECEvent2014_8_5_scaffold_72_40
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41275..41619)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98071.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
macrophage migration inhibitory factor family protein
NECEvent2014_8_5_scaffold_72_41
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41806..42192
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVT6_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43552.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_8_5_scaffold_72_42
unknown

Not on your lists

42307..42828
DNA (522bp) protein (174aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_72_43
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42852..43832)
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V4I9_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL09493.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_8_5_scaffold_72_44
unknown

Not on your lists

43950..44168
DNA (219bp) protein (73aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_72_45
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44300..44851
DNA (552bp) protein (184aa)
rbr3B; Reverse rubrerythrin-2 (EC:1.11.1.1)
Reverse rubrerythrin-2 {ECO:0000313|EMBL:CDM70180.1}; EC=1.11.1.1 {ECO:0000313|EMBL:CDM70180.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Rbr3B: reverse rubrerythrin-2 n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MNK5_9CLOT
NECEvent2014_8_5_scaffold_72_46
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44858..45175
DNA (318bp) protein (106aa)
Uncharacterized protein n=4 Tax=Clostridium botulinum RepID=B2TPQ4_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL07835.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_8_5_scaffold_72_47
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45282..46670
DNA (1389bp) protein (463aa)
methyl-accepting chemotaxis protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000287C0D0
Uncharacterized protein {ECO:0000313|EMBL:KJU72450.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
methyl-accepting chemotaxis (MCP) signaling domain protein
NECEvent2014_8_5_scaffold_72_48
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46717..47499)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LUN6_CLOB8 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR34066.1}; Flags: Precursor;; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beij
NECEvent2014_8_5_scaffold_72_49
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47502..48086)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGB4_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99012.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
lemA protein
NECEvent2014_8_5_scaffold_72_50
unknown

Not on your lists

comp(48207..48530)
DNA (324bp) protein (108aa)

This feature has no annotations

NECEvent2014_8_5_scaffold_72_51
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48661..50724
DNA (2064bp) protein (688aa)
ABC transporter, ATP binding-protein n=3 Tax=Clostridium acetobutylicum RepID=F0KDS6_CLOAE
bceA; ABC transporter ATP-binding protein
ABC transporter, ATP binding-protein {ECO:0000313|EMBL:AAK78147.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutyl
NECEvent2014_8_5_scaffold_72_52
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50878..51507
DNA (630bp) protein (210aa)
Phage shock protein A n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NEY9_9FIRM
Phage shock protein A {ECO:0000313|EMBL:CDF11146.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium s
phage shock protein A, PspA
NECEvent2014_8_5_scaffold_72_53
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51521..52579
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P060_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CCZ03041.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
hypothetical protein
NECEvent2014_8_5_scaffold_72_54
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52592..53572
DNA (981bp) protein (327aa)
Band 7 protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SR57_CLOC7 rbh
hypothetical protein
Band 7 protein {ECO:0000313|EMBL:ADL50345.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296
NECEvent2014_8_5_scaffold_72_55
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53971..54846
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLS5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKY28939.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_8_5_scaffold_72_56
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54850..55674
DNA (825bp) protein (275aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Clostridium sp. CAG:265 RepID=R6KQK9_9CLOT rbh
NECEvent2014_8_5_scaffold_72_57
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55685..56530
DNA (846bp) protein (282aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094332}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAA
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FCC1_9CLOT rbh
NECEvent2014_8_5_scaffold_72_58
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56544..56933
DNA (390bp) protein (130aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FLS7_9CLOT
Displaying items 31-58 of 58 in total

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