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NECEvent2014_8_5_scaffold_666_9

Organism: NECEvent2014_8_5_Clostridium_perfringens_28_24

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 7742..11278

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 999.99
  • Bit_score: 2320
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 999.99
  • Bit_score: 2320
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=10 Tax=Clostridium perfringens RepID=RPOC_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2322
  • Evalue 0.0
  • rbh

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3537
TTGTTCGAATTAAATAATTTTGATGCTTTACAAATCGGGTTAGCATCTCCAGAACAAATTAGAGAGTGGTCTAGAGGAGAAGTAAAGAAACCTGAAACTATTAACTATAGAACGTTAAAACCTGAGAGAGACGGATTATTCTGTGAAAGAATATTCGGACCTATAAAAGACTGGGAATGTCACTGTGGAAAATACAAAAGAGTTAGATATAAAGGTATTGTATGTGACAGATGTGGTGTTGAAGTAACTAAATCTAAAGTTAGAAGAGAGAGAATGGCTCACATTGAATTAGCTGCGCCAGTATCTCATATATGGTATTTCAAAGGAATACCTTCAAGAATGGGATTAATCCTTGATATGTCACCAAGAGCTTTAGAAAAAGTTCTATATTTTGCATCATATATAGTTATAGATCCAAAAGAAACTTCATTATTAAAGAAACAACTTCTTAATGAGAAAGAATATAGAGAAGCGTGTGATAAATATGGTGAAGAGAGCTTTGTAGCTGGAATGGGTGCAGAAGCTATAAAAACTTTATTATCAGAAATAGACTTAGAAAGAACTGCTGCTGAACTTAAAGAAGAATTAAAGCAAAGCACAGGTCAAAAGAAAGTTAGAATAATAAGAAGATTAGAAGTTGTAGAATCATTCAAATCATCAGGAAATAAACCTGAATGGATGGTAGTAGATGTAATACCAGTTATACCACCTGATTTAAGACCTATGGTTCAATTAGATGGAGGTAGATTTGCTACTTCAGATTTAAATGATTTATATAGAAGAGTTATAAATAGAAATAACAGACTTAAGAAGTTATTAGACCTTGGCGCTCCTGACATAATAGTTAGAAACGAAAAGAGAATGCTTCAAGAGGCTGTAGATGCTTTAATAGATAACGGTAGAAGAGGAAGACCTGTAACTGGTCCTGGAAACAGACCTCTTAAATCATTATCAGATATGCTTAAAGGTAAGCAAGGAAGATTCAGACAAAACCTTCTTGGTAAGAGGGTTGACTATTCAGGAAGATCAGTTATCGTTGTTGGTCCTGAATTAAAAATGTATCAATGTGGTCTTCCAAAAGAAATGGCTTTAGAATTATTCAAGCCTTTCGTTATGAAGAAATTAGTTGAAGACGGAGTTGCTCATAACATAAAGAGTGCTAAGAGAATGGTTGAAAGAGTAATGCCACAAGTATGGGATGTACTTGAAGAAGTTATAGCAGACCATCCAGTATTACTAAACAGAGCACCTACTCTACATAGACTAGGTATTCAAGCATTCCAACCAGTATTAGTTGAAGGTAGAGCTATAAAACTTCATCCACTTGTATGTACAGCATATAACGCTGACTTCGATGGAGACCAAATGGCTGTTCACGTACCTTTATCAGTTGAAGCTCAAGCAGAAGCTAGATTCTTAATGCTTGCAGCAGGTAATATAATGAAACCTTCTGATGGTAGACCAGTTTGTGTACCTACTCAGGATATGGTTCTTGGTTCATATTACTTAACAATGGATAAAGACGGAGCTAAAGGTGAAGGAAAATACTTCGCATCATTTGATGAAGTAATAATGGCTTACCAATTAAAAGAAGTTGATATTCATGCTAAGATTAACGTTAAAGTTACTAAAGAAATAGATGGAGAGCTTAAGTCAGGAATAATCAAAACAACTCCAGGATTTATAATATTCAATGAATGTATACCTCAAGACCTAGGTTTTGTAAATAGAGAAAATCCTGAAGAAATGTTCAATTTAGAAATAGATTTCTTAATAACTAAAAAGTCATTAGGAAAAATAATAGATAAATGTTACTTAAAGCATGGTCCAACTAAGACTTCAATAATGCTTGATAACATAAAAGCGACAGGATATCATTATTCATCAATTGGAGCTGTTACAGTTGCTGCTTCAGACATGATAGTTCCTCAAAAAAAATATGAGCTATTAAAAGAAGCTGATGAAACTGTAGATAAGATCGAAAAAATGTATAGAAGAGGTCTTATATCTGAAGATGAAAGATATGAAAGAGTTATAGAAAAATGGACTGAGACTACTGAGGAAGTTGCGGATACATTAATGAATAGCTTGGATAAATTTAACCCAATATTCATGATGGCAGACTCAGGAGCCAGAGGATCTAAGTCACAGATCAAACAGTTAGCTGGTATGAGAGGACTTATGGCGAGTCCATCAGGTAAAATCATCGAGTTACCAATCAGAGCATCATTTAGAGAAGGTCTTGACGTATTAGAGTACTTCATATCTACTCACGGAGCTAGAAAAGGTAACGCCGATACAGCACTTAAGACTGCTGACTCAGGTTACTTAACAAGAAGACTTGTTGACGTAAGCCAAGATGTTATAGTAAGAGAACACGACTGTGGAACTCAAAATGGTATTTACGTTGAAGAGATAAAAGAAGGTTCAGAAGTAGTTGAACAATTAGCTGAAAGATTAACAGGAAGATATACTGCAGAAGATGTTTTCCATCCAGAAACTGGAGAGCTTTTAGCTTCAAAAGATACTTATATGGATCCGATTTTAGCTGAAAAAATAGCTGATACTGGAATTCAAAAAGTAAAAATAAGATCAGTATTTACATGTGATTCTAAGGTTGGAGTATGTACTAAGTGTTATGGTATGAACATGGCAACATCATATAAAATAAATATTGGTGAAGCTGTTGGTATCGTAGCTGCTCAGTCAATCGGAGAACCAGGAACACAGCTTACAATGAGAACATTCCATACAGGTGGAGTTGCTGGAGCAGATATAACTCAAGGTCTTCCAAGGGTTGAAGAGTTATTCGAAGCAAGAAAACCAAAAGGATTAGCGATTGTAAGTGAAGTTGCAGGTACTGTAAGAATAGAAGAAACTAAGAAAAAGAGAACAGTTTATGTTGTTACTGATTCAGGAGAAGAATATAGCTATGACATACCATTTGGATCAAGATTAAAAGTTAAAGATGGTATAGCTATTGGAGCTGGAGATGAAATAACAGAAGGTTCAGTTAACCCACATGATATCATGAGCATTAAGGGTGTTGATGGTGCAAGAGAATACTTACTTTCAGAAGTTCAAAAAGTTTACAGACTTCAAGGGGTTGATATCAACGATAAGCACTTAGAAGTTGTAGTTAGACAAATGACTAGAAAGATAAAAGTAACAGAGCAAGGTGATACTAATTTATTACCAGGTGTAATGATTGATATGTTCGATTTCAGAGCTGAAAATGAAAGAGTTGAAAGCTTTGGAGGAGAAAAAGCTCAAGGAGATATAGTTCTTCTTGGTATTACTAAAGCAGCTCTTGCTACAGATAGTTTCTTATCAGCAGCATCATTCCAAGAAACAACAAGAGTTCTTACTGATGCAGCAATTAAAGGAAAAATTGATCCTCTTGTTGGATTAAAAGAAAATGTTATAATTGGTAAGTTAATTCCAGCAGGTACAGGTATGATGAAGTATAGATCATTAAAATTAAATACTGAAAACAGTAATCAAGAGACTGAAACAATAATTGAGATTGAAGAATAA
PROTEIN sequence
Length: 1179
LFELNNFDALQIGLASPEQIREWSRGEVKKPETINYRTLKPERDGLFCERIFGPIKDWECHCGKYKRVRYKGIVCDRCGVEVTKSKVRRERMAHIELAAPVSHIWYFKGIPSRMGLILDMSPRALEKVLYFASYIVIDPKETSLLKKQLLNEKEYREACDKYGEESFVAGMGAEAIKTLLSEIDLERTAAELKEELKQSTGQKKVRIIRRLEVVESFKSSGNKPEWMVVDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKKLVEDGVAHNIKSAKRMVERVMPQVWDVLEEVIADHPVLLNRAPTLHRLGIQAFQPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLAAGNIMKPSDGRPVCVPTQDMVLGSYYLTMDKDGAKGEGKYFASFDEVIMAYQLKEVDIHAKINVKVTKEIDGELKSGIIKTTPGFIIFNECIPQDLGFVNRENPEEMFNLEIDFLITKKSLGKIIDKCYLKHGPTKTSIMLDNIKATGYHYSSIGAVTVAASDMIVPQKKYELLKEADETVDKIEKMYRRGLISEDERYERVIEKWTETTEEVADTLMNSLDKFNPIFMMADSGARGSKSQIKQLAGMRGLMASPSGKIIELPIRASFREGLDVLEYFISTHGARKGNADTALKTADSGYLTRRLVDVSQDVIVREHDCGTQNGIYVEEIKEGSEVVEQLAERLTGRYTAEDVFHPETGELLASKDTYMDPILAEKIADTGIQKVKIRSVFTCDSKVGVCTKCYGMNMATSYKINIGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGADITQGLPRVEELFEARKPKGLAIVSEVAGTVRIEETKKKRTVYVVTDSGEEYSYDIPFGSRLKVKDGIAIGAGDEITEGSVNPHDIMSIKGVDGAREYLLSEVQKVYRLQGVDINDKHLEVVVRQMTRKIKVTEQGDTNLLPGVMIDMFDFRAENERVESFGGEKAQGDIVLLGITKAALATDSFLSAASFQETTRVLTDAAIKGKIDPLVGLKENVIIGKLIPAGTGMMKYRSLKLNTENSNQETETIIEIEE*