ggKbase home page

NECEvent2014_8_5_scaffold_1132_5

Organism: NECEvent2014_8_5_Clostridium_perfringens_28_24

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 8070..9428

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcriptional regulator n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR73_CLOPS similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 452.0
  • Bit_score: 858
  • Evalue 2.60e-246
  • rbh
sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 452.0
  • Bit_score: 858
  • Evalue 7.20e-247
Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:ABG86832.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 452.0
  • Bit_score: 858
  • Evalue 3.60e-246

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1359
ATGAATATAGATTTTGAAAAACTATTTTTATTAGAAAATTTAACAAATCACATTCCACTTGGATTAATTTTTATATCGCCAGAAAAGAAAATAGATTTCATTAACAAAAAAGCTGAATCTTTTTTACATAGGAAATCTAAGTCAGTTGAAACTATAGATGTATTTTCATTTTTTCCTCAATTAAATGAGCTTATTAATAATTCATTTTCGAAAAAAAACGATCAAAAGGACAGACTTGTAACTTCTTTAAATGGTAATAAGTATAACCTTGATATTTGTCCTATAAATAATGGAGATATATTTAAAGGTTGGCTTTTAATACTAAAAGACTTAAAAGAGATAATAAGTACCGTAAATAAATATTCTAACCAAGAGGCTGCTTATACATTTGATGATATAATAGGTGAAAGTCCACAGTTAAAAAAAGTATTAAGAGATGCTGAACTTATTTCAAAAAGTCCATCAACTGTTCTTATTACTGGCGAAAGTGGTTGTGGAAAAGAATTACTTGCTCAATCAATACATAACGCTAGCAATGTGTCAAATGGCCCTTTTATTGCATTGAATTGTGGTGCTATACCTAAAACTTTAATAGAAAGTGAACTTTTTGGTTATGAAGAAGCCTCATTTACAGGTTCTAAAAAAGGTGGAAAACCAGGTAAATTTGAATTAGCAGATGGTGGAACTATATTTTTAGATGAAATATGCGAAATGCCAATAGAAATGCAAGTAACACTTCTTAGAGTTATTCAAGAAGGAGTAATAACAAGAATAGGTGGAAAAACTCAAATACCTATAAACGTAAGAATTATAGCTGCTACAAATAAAAATTTAAAAGAAGAAATAAAAAAAGGAACTTTCAGAGAAGATTTATACTATAGATTAAATGTAATGCCACTTCATCTTCCTCCTTTAAAGGACAGATTAGGAGATGTTCCTATTTTAATAAACTATTTTTTAAATATAAAAAGCCAAAAATTGCACAAAGATATTCCTCATATAAATCAAAAACTCTATAAAAAAATGATTTCTTATTGTTGGCCTGGTAATATAAGAGAACTTGAAAATTGTGTTGAAAATATAGTAAATCTAAATGGTTCTACTTCTTACGAAATTAATTTTGATGAATGTCATTGTCTTAAAACTGATAACTTAGGTAATCCTATTAAACCTAGTACAACAAATTCACCTGAAAGTTATAATGAAAATTCAATTAAACCCCTAATAATTTTAGAAAAAGAAGCTATAGAAAAAGCTTTATGTACCTTTGATGGAAACATAACTAAAGCTTCTACTGCCCTTGGAATCAGTAGAAATGCTTTATATAATAAAATTAAAAGATATGGAATAAGTAAATAA
PROTEIN sequence
Length: 453
MNIDFEKLFLLENLTNHIPLGLIFISPEKKIDFINKKAESFLHRKSKSVETIDVFSFFPQLNELINNSFSKKNDQKDRLVTSLNGNKYNLDICPINNGDIFKGWLLILKDLKEIISTVNKYSNQEAAYTFDDIIGESPQLKKVLRDAELISKSPSTVLITGESGCGKELLAQSIHNASNVSNGPFIALNCGAIPKTLIESELFGYEEASFTGSKKGGKPGKFELADGGTIFLDEICEMPIEMQVTLLRVIQEGVITRIGGKTQIPINVRIIAATNKNLKEEIKKGTFREDLYYRLNVMPLHLPPLKDRLGDVPILINYFLNIKSQKLHKDIPHINQKLYKKMISYCWPGNIRELENCVENIVNLNGSTSYEINFDECHCLKTDNLGNPIKPSTTNSPESYNENSIKPLIILEKEAIEKALCTFDGNITKASTALGISRNALYNKIKRYGISK*