ggKbase home page

NECEvent2014_8_5_scaffold_1336_6

Organism: NECEvent2014_8_5_Clostridium_perfringens_28_24

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 5920..6666

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 248.0
  • Bit_score: 495
  • Evalue 1.20e-137
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 248.0
  • Bit_score: 493
  • Evalue 1.70e-136
tRNA pseudouridine synthase A n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRP6_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 248.0
  • Bit_score: 495
  • Evalue 4.10e-137
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 747
ATGAGAAATATAAAAATTACTTTAGATTATGATGGGAGTAAGTACAAGGGATGGCAAAAGCAAAACCAAAAGGGAAGTAATGTTTCCACAGTTCAAGATAAATTAGAAAAAGTACTAACTAAAATTACTAGTGAAGAGATTCAACTAATTGGTTGTGGAAGAACTGATAGTGGTGTACATGCAAAAAATTATGTAGCAAATTTTAAGACAAATTCTCTTATGACTCTAGAACAAATTATTGAATACATAAATGAATATTTACCTGAAGATATAAGGGTAAAGGAAATAAGAGAAGCAAGTGAAAGATTTCATGCTAGATTTAATGTTAAGTCTAAAACTTATGAATATACAATTGATAATAATAAGTTCAAAGATGTATTTTTAAGAAAATATGCATGGCATGTTGAAGAAAAGTTAGACTTAGAAGCTATGGAAGAAGGAGCAAAATATTTATTAGGCACTCATGACTTTAAGAGTTTTACAAGTTTAAAATCAAAGAACAAATCAACTTTAAGAACTATAAATAGCATTGAATTTCATGAAAATAATAATATATTAAGTATAAAGATAAATGGAAATGGCTTCTTATTAAATATGGTTAGAATAATAGTAGGAACTTTAGTAGATGTAGGACTTGGAAAAATTGAACCCAAATATATAAATGATATACTTGAAGCGAAGGAAAGAGCAAAAGCTTCAGAGAAAGCACCAGCTCATGGACTTTGTCTTTTAGAATTAAATTATTAA
PROTEIN sequence
Length: 249
MRNIKITLDYDGSKYKGWQKQNQKGSNVSTVQDKLEKVLTKITSEEIQLIGCGRTDSGVHAKNYVANFKTNSLMTLEQIIEYINEYLPEDIRVKEIREASERFHARFNVKSKTYEYTIDNNKFKDVFLRKYAWHVEEKLDLEAMEEGAKYLLGTHDFKSFTSLKSKNKSTLRTINSIEFHENNNILSIKINGNGFLLNMVRIIVGTLVDVGLGKIEPKYINDILEAKERAKASEKAPAHGLCLLELNY*