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NECEvent2014_8_5_scaffold_4754_1

Organism: NECEvent2014_8_5_Clostridium_perfringens_28_24

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(130..972)

Top 3 Functional Annotations

Value Algorithm Source
S1 RNA binding domain protein n=4 Tax=Clostridium perfringens RepID=H7CX30_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 280.0
  • Bit_score: 554
  • Evalue 4.90e-155
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 280.0
  • Bit_score: 554
  • Evalue 1.40e-155
S1 RNA binding domain protein {ECO:0000313|EMBL:EIA16931.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 280.0
  • Bit_score: 554
  • Evalue 6.90e-155

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 843
ATGATAATAAACATAGGACAATTTAATAAAATGAAAGTAGTAAGAGAAGCGGATTTTGGATACTACTTAGACAGAGGAACTAGAAATACTTCTGATGATATATTAATTCCAACTGGAAATTTAGATGGAAGAGAAATCAAGGTTGGAGATGAGGTAGAAGCTTTTATATATAGAGATTCTAGAGATAGACTTATAGCCACATTAAAAAAGCCTTTAGCTGTTGTGGGAGATGTTGCTTTATTAGAAGTTAAATCTATTACTAAAATAGGTGCTTTTGTAGATTTTGGTTTAGAAAGAGATATACTTGTTCCATTAAAAGAGCAAAAATACAAAATGGAAGAGGGTAAAAAGTACTTAGTATATATTTATGTAGATAAAACAGGAAGATTAGCAGCAACAACAGAGGTTGATAAATACTTAGATGAAATAGAAGAACCTAAAATGGGAACAGAAGTTTCAGGAATAGTTTATGGATACCAAACTAATGGTTCTTTAAGAGTAGCAGTAGATAATAAACATAGAGCTGTGGTTCTTAAAAATGAATATTTTACAAATATTAAACCTGGAGATAATATAAAAGGTAAGATAATAAAGGTTTATGAAGATGGAATAGTAGGATTATCTTTAAGAAATCATAAACTTAAGGAAAGAAATGAATTAGGAGACACTATATTAAATTACTTAAAAGAAAATGGTGGAGTTATGAGCTTAAATGATAAGAGTACTCCAGATGAAATAAGAAATACTTTTAAAACTTCTAAAAATTACTTTAAAATGGCCTTAGGTGGACTTATGAAAAAAGGTTTAATTGAGCAAGATGAATTTGGTACTAGATTAAAATAA
PROTEIN sequence
Length: 281
MIINIGQFNKMKVVREADFGYYLDRGTRNTSDDILIPTGNLDGREIKVGDEVEAFIYRDSRDRLIATLKKPLAVVGDVALLEVKSITKIGAFVDFGLERDILVPLKEQKYKMEEGKKYLVYIYVDKTGRLAATTEVDKYLDEIEEPKMGTEVSGIVYGYQTNGSLRVAVDNKHRAVVLKNEYFTNIKPGDNIKGKIIKVYEDGIVGLSLRNHKLKERNELGDTILNYLKENGGVMSLNDKSTPDEIRNTFKTSKNYFKMALGGLMKKGLIEQDEFGTRLK*