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NECEvent2014_8_5_scaffold_1509_5

Organism: NECEvent2014_8_5_Campylobacter_ureolyticus-rel_29_16

near complete RP 51 / 55 BSCG 47 / 51 ASCG 9 / 38 MC: 1
Location: comp(4099..5988)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Campylobacter ureolyticus RepID=UPI00037367A6 similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 629.0
  • Bit_score: 1211
  • Evalue 0.0
  • rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=883165 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 630.0
  • Bit_score: 1202
  • Evalue 0.0
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 622.0
  • Bit_score: 930
  • Evalue 2.70e-268

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Taxonomy

Campylobacter ureolyticus → Campylobacter → Campylobacterales → Epsilonproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1890
ATGGCATCAAACGCAAAAAAACCACTTACTGCAAAACAATCTTTAGAAGAAGTAGAAGAACTTTTTAAAGAAAATGAAAAAGGATATGTAACATATGAAAAACTTATTAAGCTTTTTGATAAAAGTCCAACACAAGCAAATACTAAAAAAATAGAGTCTTTAGCTAAAAAATATAAAGTTACTTTAAAAACCTCAGCTGAAGTTGCGGAAATAAAAAATATCGAAGATGCCAAAAAAAAGGCACTAAAAGCTAAAAAATATATAGAAGAAAATTTAGATGAAGAATTTGATATAACAAATGAAACAGAACTTTTAGAATGGGGGAGAAGTGAAAATCCCGTAAGAATGTATTTAAGAGAAATGGGGCAAATTTCACTTCTAACAAAAGAGGAAGAGATTGAAATAAGCAAGCAAATAGAACTTGGTGAAGATATTATAATAGATGCCTTTTGCTCCGTTCCATATTTAATAGACTTTATACTTGATTATAAAGTTCCTTTAATAAATCGCGAAAGAAGAGTAAAAGAGCTATTTAAAAACTTTGATGAAGATAATAACGAAGAAGATGATATAGAAGATGAGGATTTTGAAGAAAATGAAGAAGATAAAAACTCAAATAGAGAAAAAAGAAACGATAAAAGAGCTATAAGAGTTACAGAAAGCTTTAAAGCACTAGAAAAAGCCAAAAAAGACTGGCTTAAATATGCAGAAAAAAACGAGGATATTATAAAAGAAGGTGAAGATATGCTTTACGCAAAACTTAGCCTCACTTTTAAAAAGAAAATTTTAAAAGAAAAACTTATGGATCTAGGCCCTACAAGCAAGCTTATCAATGAGATAGTTAAACAGATGGAAACTGCTTTAAAAAGCGACGATCATTTTGAAAAAGAACTCAAAAGACTCGAATATAGACTCCCTCTTTTTAGTAAAGAACTTAAAGAAAATCATGCTAAAATTTTAAAAGATATCACAAAATTAAGTAAAGATGAAATAACTGAAAGAGTTCCTGAAGCAACTATGGTTTCTACATATGTCGATATCAAAAAGCTTTTTCAAACAAAAGAGGCAAGTAAAGATAGTTTTGATATGGATCCAAAAAGACTAGAAGTTATTTTAGAACAAATTAAAAGAGGTAAAAATATTTCAGATCGAGCAAAAGGTAAAATGGCAAGATCAAATTTAAGACTTGTTGTAAGCATAGCTAAGCGATACACCAATCGTGGACTTCCATTTTTAGATCTCATACAAGAGGGAAATATTGGATTGATGAAAGCAGTTGATAAATTTGAGTATAAAAAAGGTTATAAATTTTCTACATATGCAACTTGGTGGATAAGACAAGCTATATCAAGAGCAATTGCCGATCAAGCAAGAACTATAAGAATTCCTATACATATGATAGAAACAATAAATAGGATAAATAAAATAAATAGAAAATATATACAAGAAGAAGGAAAAGAAGCAGACATTAATGTAATTGCTGAAGAAATTGGCATGAGCGTAGATAAAGTAAAGCAAGTTATTAAAATAACGAAAGAACCAATAAGCCTTGAAGCACCAATTGGAAATGAAGATGATGGAAAATTTGGTGATTTTGTAGAGGATAAAAGTTCACCTTCACCTATAGACAATGTGCTTAATGATGATTTAAAAGAACAAATCGATGCAGTTTTAGAGCAACTAAATGAAAGAGAAAGAACTGTTATTAGAATGCGTTTTGGGTTATTAGATGATGAAAGCGATAGAACCTTAGAAGAAATTGGAAAAGCGCTTAATATAACAAGAGAAAGAGTTCGCCAAATAGAAAGCTCAGCGATAAAAAAACTAAAACATCCAAAAATTGGAAGAGACCTTAAGAATTATATAGAAATGAACTTTTTGAAAAATTAA
PROTEIN sequence
Length: 630
MASNAKKPLTAKQSLEEVEELFKENEKGYVTYEKLIKLFDKSPTQANTKKIESLAKKYKVTLKTSAEVAEIKNIEDAKKKALKAKKYIEENLDEEFDITNETELLEWGRSENPVRMYLREMGQISLLTKEEEIEISKQIELGEDIIIDAFCSVPYLIDFILDYKVPLINRERRVKELFKNFDEDNNEEDDIEDEDFEENEEDKNSNREKRNDKRAIRVTESFKALEKAKKDWLKYAEKNEDIIKEGEDMLYAKLSLTFKKKILKEKLMDLGPTSKLINEIVKQMETALKSDDHFEKELKRLEYRLPLFSKELKENHAKILKDITKLSKDEITERVPEATMVSTYVDIKKLFQTKEASKDSFDMDPKRLEVILEQIKRGKNISDRAKGKMARSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMKAVDKFEYKKGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINRINKINRKYIQEEGKEADINVIAEEIGMSVDKVKQVIKITKEPISLEAPIGNEDDGKFGDFVEDKSSPSPIDNVLNDDLKEQIDAVLEQLNERERTVIRMRFGLLDDESDRTLEEIGKALNITRERVRQIESSAIKKLKHPKIGRDLKNYIEMNFLKN*