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NECEvent2014_8_5_scaffold_6017_1

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(1..375)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional activator CadC n=1 Tax=Escherichia coli 2845350 RepID=M8Y900_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 125.0
  • Bit_score: 252
  • Evalue 1.80e-64
cadC; transcriptional activator CadC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 125.0
  • Bit_score: 252
  • Evalue 5.00e-65
Transcriptional activator {ECO:0000313|EMBL:AAL67383.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 125.0
  • Bit_score: 252
  • Evalue 2.50e-64

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGCAACAACCTGTAGTTCGCGTTGGCGAATGGCTTGTTACTCCGTCCATAAACCAAATTAGCCGCAATGGGCGTCAACTTACCCTTGAGCCGAGATTAATCGATCTTCTGGTTTTCTTTGCTCAACACAGTGGCGAAGTACTTAGCAGGGATGAACTTATCGATAATGTCTGGAAGAGAAGTATTGTCACCAATCACGTTGTGACGCAGAGTATCTCAGAACTACGTAAGTCATTAAAAGATAATGATGAAGATAGTCCTGTCTATATCGCTACTGTACCAAAGCGCGGCTATAAATTAATGGTGCCGGTTATCTGGTACAGCGAAGAAGAGGGAGAGGAAATAATGCTATCTTCGCCTCCCCCTATACCAGAG
PROTEIN sequence
Length: 125
MQQPVVRVGEWLVTPSINQISRNGRQLTLEPRLIDLLVFFAQHSGEVLSRDELIDNVWKRSIVTNHVVTQSISELRKSLKDNDEDSPVYIATVPKRGYKLMVPVIWYSEEEGEEIMLSSPPPIPE