ggKbase home page

ACD81_11_47 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
putative transcription termination factor similarity KEGG
DB: KEGG
47.7 151.0 139 6.10e-31 saal:L336_0143
nusB: transcription antitermination factor N (db=HMMTigr db_id=TIGR01951 from=3 to=137 evalue=3.7e-50 interpro_id=IPR011605 interpro_description=NusB antitermination factor GO=Molecular Function: transcription termination factor activity (GO:0003715), Biological Process: transcription termination (GO:0006353)) iprscan interpro
DB: HMMTigr
null null null 3.70e-50 saal:L336_0143
NusB (db=HMMPfam db_id=PF01029 from=7 to=134 evalue=4.1e-35 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 4.10e-35 saal:L336_0143
NusB-like (db=superfamily db_id=SSF48013 from=3 to=133 evalue=1.2e-33 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: superfamily
null null null 1.20e-33 saal:L336_0143
no description (db=Gene3D db_id=G3DSA:1.10.940.10 from=4 to=133 evalue=1.6e-31 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: Gene3D
null null null 1.60e-31 saal:L336_0143
NusB (db=HAMAP db_id=MF_00073 from=2 to=138 evalue=22.448) iprscan interpro
DB: HAMAP
null null null 2.24e+01 saal:L336_0143
seg (db=Seg db_id=seg from=142 to=161) iprscan interpro
DB: Seg
null null null null saal:L336_0143
nusB; transcription antitermination factor NusB; K03625 N utilization substance protein B alias=ACD81_2969.98551.54G0047,ACD81_2969.98551.54_47,ACD81_C00011G00047 id=133279 tax=ACD81 species=unknown genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi organism_group=OD1, not OD1-i organism_desc=OD1 similarity UNIREF
DB: UNIREF90
100.0 null 321 1.60e-85 saal:L336_0143
N utilization substance protein B-like protein {ECO:0000313|EMBL:KKT43269.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;" UNIPROT
DB: UniProtKB
100.0 161.0 321 5.60e-85 A0A0G1K603_9BACT