ggKbase home page

ACD81_60_4

Organism: ACD81

near complete RP 45 / 55 MC: 11 BSCG 43 / 51 MC: 5 ASCG 0 / 38
Location: comp(1927..2667)

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 235.0
  • Bit_score: 167
  • Evalue 5.50e-39
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=1 to=233 evalue=2.1e-52 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.10e-52
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=1 to=208 evalue=3.2e-50) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.20e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE2_OD1_ACD81_44_13 → Wolfebacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATATATGAAGACGAAAATGTGGTGGCTATCAATAAGCCAGCGCATCTTTTAGTCCATCCCTACGCAGATAATAAGGATTATGCGCTAACCACGTGGCTATTAAAGCATTATCCAGGAGTTAAGACAGTCGGGGATGATCCAGAGCAGCGTCCTGGAATTGTACATCGTCTCGATAAAGATACATCGGGAGTAATCTTAGTTCCGCGGAGCCACGAATATTTTAGGTATTTGAAGGAACTGTTTCAATCGCATGGTATTAAAAAATCATACCTCGCATTAGTATGGGGAAAGGTACAGGAAAAGAAAGGAACGATTAATAAGCCAATCAGCCTAAAGGGAGGAACGACAAAGCGAACGGTGCATGATGGTAAAATGACCAAAGAAGCATTGACCGATTATGAGGTAGTAAAGCGGTTCACGTTCGACGATCCAGACACAGAAACAAGAAAAATATACGATTTTACCTTAGTTCGCGCATGGCCTAAAACAGGACGAACGCACCAAATTCGCGTGCATTTGGCATCAATTGGGTTCGCAATCGTAGGAGATACGATGTACGGAGCAAAAAAGAACCCCCTTGCACTTGATCGACAATTCCTACACGCAGAATCTATTGAATTTCTCGCAGCAGAAGGACATAAGTTAAATATAGAAGCGGAACTTCCAGCAGATCTCAAAAAGGTATTGGTACGACTAGAAGAATACGATGTTTCCGCACCTCCATTAAATGAGCGGGCATAA
PROTEIN sequence
Length: 247
IYEDENVVAINKPAHLLVHPYADNKDYALTTWLLKHYPGVKTVGDDPEQRPGIVHRLDKDTSGVILVPRSHEYFRYLKELFQSHGIKKSYLALVWGKVQEKKGTINKPISLKGGTTKRTVHDGKMTKEALTDYEVVKRFTFDDPDTETRKIYDFTLVRAWPKTGRTHQIRVHLASIGFAIVGDTMYGAKKNPLALDRQFLHAESIEFLAAEGHKLNIEAELPADLKKVLVRLEEYDVSAPPLNERA*