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NECEvent2014_8_7_scaffold_153_20

Organism: NECEvent2014_8_7_Klebsiella_pneumoniae-rel_56_327_partial

partial RP 20 / 55 MC: 3 BSCG 17 / 51 ASCG 10 / 38 MC: 1
Location: 17793..18278

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system effector Hcp1 family n=1 Tax=Klebsiella variicola CAG:634 RepID=R5X6X5_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 161.0
  • Bit_score: 334
  • Evalue 7.80e-89
  • rbh
Type VI secretion system secreted protein Hcp {ECO:0000313|EMBL:EWD74888.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 161.0
  • Bit_score: 335
  • Evalue 3.80e-89
type VI secretion system effector similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 161.0
  • Bit_score: 318
  • Evalue 9.60e-85

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Taxonomy

Klebsiella pneumoniae → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGCCCATTCCGGCATACATGTGGCTTAAAGACGATGGCGGCGCAGAAATTAAAGGGTCGGTAGATGTTCAGGATCGTGAGGGAAGCATAGAGATTGTTGGTTTTAGCCACGGCCTGAATATTCCGGTAGATAGCGCCAATGGGAAGATAACGGGTAAGCGTTCTCATTCACCGATGATGATTGAAAAGGAGTTTGATAGCTCCAGCCCGTATCTCTATAAAGCTGTCGCGACGGGGCAAACGCTTAAAAGCGCGGAGATCCGCTGGTATCGTATCAACCACGCAGGGCAGGAAGAATGCTACTTCATCATGCTGATCGAGGGAGTGAAAGTAACAGGCATTAACCCGGGAATGCCGAACGCTAAAATGACAGGGAACTCGCAAATCAACCACATGGAATCAGTTTCCCTTATGTATGACAAAATTACCTGGCGCTATGTTGATGGTAATGTCCAGTATTCGGACGACTGGAACGTGAGAGCGTGA
PROTEIN sequence
Length: 162
MPIPAYMWLKDDGGAEIKGSVDVQDREGSIEIVGFSHGLNIPVDSANGKITGKRSHSPMMIEKEFDSSSPYLYKAVATGQTLKSAEIRWYRINHAGQEECYFIMLIEGVKVTGINPGMPNAKMTGNSQINHMESVSLMYDKITWRYVDGNVQYSDDWNVRA*