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NECEvent2014_8_7_scaffold_2002_3

Organism: NECEvent2014_8_7_Clostridium_butyricum_31_15

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 3 ASCG 16 / 38 MC: 1
Location: comp(1654..2550)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 304.0
  • Bit_score: 515
  • Evalue 4.90e-143
ylyB; RNA pseudouridine synthase YlyB (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 253.0
  • Bit_score: 445
  • Evalue 1.30e-122
Pseudouridine synthase n=2 Tax=Clostridium butyricum RepID=M8K6V2_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 304.0
  • Bit_score: 515
  • Evalue 3.50e-143
  • rbh

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Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 897
TTGAGCAGAATTGCAAAAAGTGAAATAGATAAAGGAAATTATGAAAAAGGACTCTATTTTGCAGTTAATTCTTTTAAATTTGACAAGAAAAATTTTGTCATGACTGATAGAAACAGTGCCTATGACTATACTGGTACTTATAAATTAAAAAAGGCTGACGAAATTGAAATAATGATACCAGAACCTGAAATACTAAGTGTTGAAGCTGAAAATATACCTATTGATATTGTTTATGAGGATGAAGATGTTATAGTAGTTAATAAAGCACAAGGAATGGTTGTTCATCCTGCACCAGGAAACTATAATGGTACATTAGTAAATGCATTACTTTATCATTGTAAAGACTTGTCAAGTATAAATGGAGTGATAAGGCCAGGTATTGTACATAGAATTGATAAGGATACATCAGGAATTCTTGTTATTGCAAAAAATGATGATGCGCATAATAAATTAAGTGAGCAATTAAAAGATCATTCAATGAAAAGAGAGTATTATGCTCTAATTGAAGGAAGACTAAAAAATAATGATGGAACTATTGATAAACCCTTAGGAAGATGTAAGAAAGATAGATTAAAAATAGGAATAATAGAAGATGGTAAGAGAGCTGTGACTCATTATGAAGTGGTTGAAAGATATAATGGATATACACTTGTGAAATGTGTCTTAGAAACAGGAAGAACCCATCAAATAAGAGTTCATATGGCATCTATAGGTTTTCCTCTTGTTGGAGATCCATTGTATGGATTTAAGAGACAAAAATTTAAACTTGAGGGACAGGTACTTCATGCAAGAACATTAGGATTTATACATCCTAGAACTGGTGAGTATATGGAATTTACAAGTGAACTTCCACAATACTTTTGCGATTTAATAAATAAACTGAAAAACGAAATGTAG
PROTEIN sequence
Length: 299
LSRIAKSEIDKGNYEKGLYFAVNSFKFDKKNFVMTDRNSAYDYTGTYKLKKADEIEIMIPEPEILSVEAENIPIDIVYEDEDVIVVNKAQGMVVHPAPGNYNGTLVNALLYHCKDLSSINGVIRPGIVHRIDKDTSGILVIAKNDDAHNKLSEQLKDHSMKREYYALIEGRLKNNDGTIDKPLGRCKKDRLKIGIIEDGKRAVTHYEVVERYNGYTLVKCVLETGRTHQIRVHMASIGFPLVGDPLYGFKRQKFKLEGQVLHARTLGFIHPRTGEYMEFTSELPQYFCDLINKLKNEM*