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NECEvent2014_8_7_scaffold_3469_2

Organism: NECEvent2014_8_7_Clostridium_butyricum_31_15

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 3 ASCG 16 / 38 MC: 1
Location: 565..1674

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=3 Tax=Clostridium butyricum RepID=B1QWY9_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 369.0
  • Bit_score: 717
  • Evalue 5.80e-204
  • rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 369.0
  • Bit_score: 717
  • Evalue 8.10e-204
rpoD1; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 369.0
  • Bit_score: 675
  • Evalue 9.30e-192

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1110
ATGGAACAAAAAGCAAAAGGAAAAGCTGCAAAGACTAAGGATGATAAAAATGATAAAAACGTTAAAATGTCAGCAGTTAAAGAATTATTAGATAAAGGTAAGAAAAATGGATCTTTAACATATAAAGAAATTATGGAAGCTATGGATCATATAGATTTAGGTCCAGAACAAATTGAAAAAATATATGAAGCATTAGAAATGATGAATATAGAAATTATTGGAGAGGCTAATGAAACAGCTGATGCTGAAGAGGAAATAGATTTATCAGTTCCAGAAGGAATAGCTATTGATGATCCAGTAAGGATGTATTTAAAGGAAATAGGTAAGGTTCCATTATTATCTTCAGAACAAGAAATAGAATATGCACAACAAATAGAAGAAGGTAATCAAAGAGCAAAGAAGAAACTTGCTGAAGCCAACTTAAGACTTGTTGTAAGTATTGCTAAAAGATATGTTGGAAGAGGTATGTTATTCTTAGACTTAATCCAAGAAGGAAATTTAGGTCTTATAAAAGCTGTTGAAAAGTTTGACTATAGAAAAGGATACAAATTCTCTACTTATGCTACATGGTGGATAAGACAGGCGATAACAAGAGCTATTGCTGACCAAGCAAGAACTATAAGAATTCCTGTTCATATGGTTGAAACTATAAATAAGCTTATAAGAGTTCAAAGACAATTATTACAAGAATTAGGAAGAGATCCATTCCCAGAAGAAATTTCAAAAGTTATGGACCTTCCAGTAGATAAGGTTCGTGAAATACAAAAGATTGCACAAGAACCAGTATCTTTAGAAACTCCTATAGGTGAAGAAGAAGATTCCCATTTAGGTGATTTTATACCAGATGATGAAGCTCCAGCACCAGCTGAAGCAGCTGCATTTACAATGCTTAAAGAACAGCTTATAAATGTACTAGATACTTTAACACCAAGAGAAGAAAAAGTATTAAGATTAAGATTTGGTTTAGATGATGGAAGAGCAAGAACTCTTGAAGAAGTTGGTAAAGAATTTAATGTAACAAGAGAAAGAATAAGACAAATTGAGGCTAAGGCTTTAAGAAAGTTAAGACACCCATCAAGAAGTAAAAAATTAAAAGATTATTTAGATTAA
PROTEIN sequence
Length: 370
MEQKAKGKAAKTKDDKNDKNVKMSAVKELLDKGKKNGSLTYKEIMEAMDHIDLGPEQIEKIYEALEMMNIEIIGEANETADAEEEIDLSVPEGIAIDDPVRMYLKEIGKVPLLSSEQEIEYAQQIEEGNQRAKKKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQELGRDPFPEEISKVMDLPVDKVREIQKIAQEPVSLETPIGEEEDSHLGDFIPDDEAPAPAEAAAFTMLKEQLINVLDTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLKDYLD*