ggKbase home page

ACD17_85_7 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
cold shock protein similarity KEGG
DB: KEGG
59.7 67.0 86 4.40e-15 mvs:MVIS_1827
Cold-shock DNA-binding domain family protein n=1 Tax=Moritella sp. PE36 RepID=A6FGV5_9GAMM (db=UNIREF evalue=1.0e-15 bit_score=85.1 identity=59.7 coverage=95.5882352941177) similarity UNIREF
DB: UNIREF
59.7 95.59 85 1.00e-15 mvs:MVIS_1827
Cold shock protein, CspA type (db=HMMPIR db_id=PIRSF002599 from=1 to=67 evalue=7.8e-31 interpro_id=IPR012156 interpro_description=Cold shock, CspA GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: HMMPIR
null null null 7.80e-31 mvs:MVIS_1827
CSD (db=HMMPfam db_id=PF00313 from=1 to=65 evalue=5.1e-25 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 5.10e-25 mvs:MVIS_1827
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=67 evalue=3.4e-23 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
null null null 3.40e-23 mvs:MVIS_1827
no description (db=HMMSmart db_id=SM00357 from=3 to=66 evalue=1.3e-22 interpro_id=IPR011129 interpro_description=Cold shock protein GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: HMMSmart
null null null 1.30e-22 mvs:MVIS_1827
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=1 to=66 evalue=4.0e-17 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) iprscan interpro
DB: Gene3D
null null null 4.00e-17 mvs:MVIS_1827
COLD SHOCK DOMAIN CONTAINING PROTEINS (db=HMMPanther db_id=PTHR11544 from=1 to=60 evalue=5.5e-17) iprscan interpro
DB: HMMPanther
null null null 5.50e-17 mvs:MVIS_1827
COLDSHOCK (db=FPrintScan db_id=PR00050 from=4 to=19 evalue=3.7e-14 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 3.70e-14 mvs:MVIS_1827
COLDSHOCK (db=FPrintScan db_id=PR00050 from=39 to=57 evalue=3.7e-14 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 3.70e-14 mvs:MVIS_1827
COLDSHOCK (db=FPrintScan db_id=PR00050 from=25 to=34 evalue=3.7e-14 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 3.70e-14 mvs:MVIS_1827
cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_02_FULL_Chlamydiae_45_22_curated UNIPROT
DB: UniProtKB
100.0 67.0 145 3.00e-32 ggdbv1_88562879