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NECEvent2014_4_1_scaffold_878_3

Organism: NECEvent2014_4_1_Staphylococcus_epidermidis_32_27

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 ASCG 12 / 38 MC: 2
Location: comp(669..1550)

Top 3 Functional Annotations

Value Algorithm Source
Putative ribose uptake protein RbsU n=24 Tax=Staphylococcus epidermidis RepID=RBSU_STAES similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 293.0
  • Bit_score: 568
  • Evalue 3.40e-159
  • rbh
Sugar transport protein {ECO:0000313|EMBL:EES35108.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 293.0
  • Bit_score: 568
  • Evalue 4.80e-159
Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 293.0
  • Bit_score: 568
  • Evalue 9.70e-160

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 882
ATGGACTTTATAGCTATTTTAATCGGATTAGGGCCACTATTAGGTTGGGGATTATTTCCAACGATTGCTTCTAAGTTTGGTGGACGTCCAGTCAATCAAATCTTTGGCGCTACTGTTGGTACTTTAATCTTCGCAATTGTTCTAGCACTATTTAAAGGTATCGGTTTACCAGGAGGTATGGCATTAGTATTTTCGCTCATATCAGGTGCAGGATGGGCATTTGGTCAAATTATTACTTTTAAAGCGTTCGAATTAGTAGGTTCATCAAGAGCGATGCCAATTACTACTGCATTTCAATTACTTGGTGCATCTTTATGGGGCGTTTTTGCGCTTGGCAACTGGCCCGGTATAACAAACAAAATCATTGGATTTCTAGCTTTACTCGTAATTCTTATAGGTGCACGTATGACTGTATGGACTGAAACAAAACAACAAGAATATAGTAAAAATCTACGAAGTGCAGTGCTCTTATTACTTGTAGGTGAAATTGGCTATTGGATATATTCTGCTGCACCTCAAGCAACAGATATTGGTGGATTTAAAGCTTTTTTACCTCAAGCTATAGGGATGGTCATTGTGGCTGTCATCTATGCGTTGATGAATATGTCTAAAGGTAATGCTTTTAAAGAGAAAGTAAGTTGGCAACAAATAATATCCGGATTTTTCTTTGCATTTGCTGCTTTAACTTATTTAATTTCAGCACAACCTAATATGAATGGTTTAGCAACAGGATTTGTTCTATCTCAAACATCTGTAGTATTAGCAACGCTAACAGGCATTTTTTTCTTAAATCAGAAAAAAACATCAAAAGAATTAATGATTACAATTGTGGGATTAGTTCTTATTTTAGTTGCAGCATCAATCACAGTGTTTATTAAATAA
PROTEIN sequence
Length: 294
MDFIAILIGLGPLLGWGLFPTIASKFGGRPVNQIFGATVGTLIFAIVLALFKGIGLPGGMALVFSLISGAGWAFGQIITFKAFELVGSSRAMPITTAFQLLGASLWGVFALGNWPGITNKIIGFLALLVILIGARMTVWTETKQQEYSKNLRSAVLLLLVGEIGYWIYSAAPQATDIGGFKAFLPQAIGMVIVAVIYALMNMSKGNAFKEKVSWQQIISGFFFAFAALTYLISAQPNMNGLATGFVLSQTSVVLATLTGIFFLNQKKTSKELMITIVGLVLILVAASITVFIK*