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NECEvent2014_4_1_scaffold_1397_1

Organism: NECEvent2014_4_1_Propionibacterium_acnes-rel_59_5_partial

partial RP 10 / 55 MC: 2 BSCG 6 / 51 ASCG 5 / 38
Location: comp(2..340)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=8 Tax=Propionibacterium RepID=E4B819_PROAA similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 113.0
  • Bit_score: 227
  • Evalue 5.50e-57
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EGE93877.1}; TaxID=765072 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Prop UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 113.0
  • Bit_score: 227
  • Evalue 7.80e-57
putative sigma subunit similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 113.0
  • Bit_score: 227
  • Evalue 1.60e-57

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Taxonomy

Propionibacterium acnes → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGCTGGAATCTGACATGACAGGTTCCTTTTCTGAATCCCGCGACGATTGGCTTCCCCAGCTCTACCAAGAGAGGTGGGACGCCTTCGTGCGGTTGGCCACCTTGCTGTTGGCGGACCAGCAAGTAGCTGAGGATGCGGTGATCGCGGCCTTCGCCACAAGTTACTTGCGTGATCCGAAACTACATTCGTATGAGCATGCCGTGTCGTATGTGCGCACTGCTGTCGTGAACAAGGCGAGGAGCCGTCAGCCAGCTGAGCGGGATGCCACCCCACCCGAAACTCCTGAAGACCTGGCCTATTGGTGCCTGAGGGGTCTGCTGGCTCGTCAGCGCGAGGTG
PROTEIN sequence
Length: 113
MLESDMTGSFSESRDDWLPQLYQERWDAFVRLATLLLADQQVAEDAVIAAFATSYLRDPKLHSYEHAVSYVRTAVVNKARSRQPAERDATPPETPEDLAYWCLRGLLARQREV