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NECEvent2014_4_2_scaffold_78_34

Organism: NECEvent2014_4_2_Clostridium_butyricum_28_558

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(38811..39419)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF family n=2 Tax=Clostridium butyricum RepID=C4ID90_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 202.0
  • Bit_score: 413
  • Evalue 1.30e-112
  • rbh
RNA polymerase sigma 70 {ECO:0000313|EMBL:KHD13841.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 202.0
  • Bit_score: 415
  • Evalue 6.10e-113
sigma-70 region 2 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 191.0
  • Bit_score: 210
  • Evalue 3.50e-52

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 609
ATGGATTACAAATACATTGAAACATTAGTCAAACAATCAAAAGATGGTAATGAAATATCTAAAGAAAATTTAGCAAAGGAATTTACCCCTTATATAAAAAATTTATGTAGCAAGACTTTCATCCACGGATATGATTTTTATGATTTGCAAAATGAATGCTTCCAAAGTCTCTTTAAATGTGTGTCATCATATAACTTAGAAAATCATAGATTTGTTGCCTATGCCACAAATGGAATAAAGAATAATCTGTATGACTTGATACGTAAAAATCAAAATAGAAAAATATTTGATGGAAATGACTGCCTTATAATAACAGATGAATTTCAAAGAAGCCTGATCTCAAATGAAATTAATGCAGAAGATTTAATGTGTAGAAAATGTGATTATACTGAAATTAGAAATGCATTAAATAAACTTACACATACTGAACATGAAATAATAACCTTCTTATTTTTTCCAAAAACTTCTTCTAAACATACACTAAAAGAGTTCTCAGTTTTAAAAAATATATCATATTCAGCTGCTATAAAAAGAAAAAATACTGCATTAAGAAAACTTTATGAACTGTTACAACCTATTTTTTATGGAGGTGAGTTACATGGAAATTAA
PROTEIN sequence
Length: 203
MDYKYIETLVKQSKDGNEISKENLAKEFTPYIKNLCSKTFIHGYDFYDLQNECFQSLFKCVSSYNLENHRFVAYATNGIKNNLYDLIRKNQNRKIFDGNDCLIITDEFQRSLISNEINAEDLMCRKCDYTEIRNALNKLTHTEHEIITFLFFPKTSSKHTLKEFSVLKNISYSAAIKRKNTALRKLYELLQPIFYGGELHGN*