ggKbase home page

NECEvent2014_4_4_scaffold_45_18

Organism: NECEvent2014_4_4_Anaerococcus_vaginalis-rel_29_30

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 16519..17046

Top 3 Functional Annotations

Value Algorithm Source
ECF family DNA-directed RNA polymerase sigma subunit SigW n=1 Tax=Anaerococcus obesiensis RepID=UPI0002D4E09A similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 175.0
  • Bit_score: 355
  • Evalue 2.70e-95
  • rbh
Sigma-70 region 2 {ECO:0000313|EMBL:EEU13347.1}; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus vaginalis ATCC 51170.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 174.0
  • Bit_score: 328
  • Evalue 6.50e-87
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 175.0
  • Bit_score: 139
  • Evalue 6.60e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Anaerococcus vaginalis → Anaerococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 528
ATGAGCGTAGATTTTTTATTGATATATAGGGCAAAAAATGGCGATAGTGATGCTTTTGAAATTATAATACGAAAATATTATGGAAATATATTTAACTATTGCAAATATCATGCTTTGGATATAAATACGGCTGAGGACATAACACAGGATGTATTTTTAACTTTTCTAAAAACGATTAATCATTATAAACATAAGGGCAAACTTTTAAATTATTTATATACAATTGCTCGTAATAAATGTATTGATGAAAAAAAGAAGACAAGCAATAAAGATCTTTATATTGAAGATTTTTCTGAAAATATATTTTTGGAATTTACAGAATCTGATAGGAAAATAGAATATTTAGATGTTAAAGAAGCTGTTAAAAAATTGCCATCAGATATTAAGGATGTAATAATTCTATATTATTTTTTTGATAGAAAACAAAAAGAAGTTGCAAAGATTTGTGGCATTTCATTAGAATTAACAAAATATAGGCTTAGGAAAGGCAAGGATATGATAAGAAAGTATGTAGAAGGTGAAAGATGA
PROTEIN sequence
Length: 176
MSVDFLLIYRAKNGDSDAFEIIIRKYYGNIFNYCKYHALDINTAEDITQDVFLTFLKTINHYKHKGKLLNYLYTIARNKCIDEKKKTSNKDLYIEDFSENIFLEFTESDRKIEYLDVKEAVKKLPSDIKDVIILYYFFDRKQKEVAKICGISLELTKYRLRKGKDMIRKYVEGER*