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NECEvent2014_4_4_scaffold_22_25

Organism: NECEvent2014_4_4_Clostridium_perfringens_27_15

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(24612..25076)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=7 Tax=Clostridium perfringens RepID=RIMP_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 154.0
  • Bit_score: 309
  • Evalue 1.50e-81
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 154.0
  • Bit_score: 309
  • Evalue 4.30e-82
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 154.0
  • Bit_score: 309
  • Evalue 2.10e-81

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 465
ATGAAAAAAGAACAACTTGTAGCTGATCTTGAAGCACTTTGTGCTCCTATAGTTAAAGAAAAGGGATATGATTTATATCATATTGAATATGTAAAAGAAAATAATGAATATTATTTAAGATTATATATAGAAAAGCCAGAGGAGAGAATTTCTCTAAGGGATTGTGAAATTGTAAGTAGAGCATTAAGTGATATGCTTGATATAGAAGATCCAATAAAAGATGCGTACTTCTTAGAAGTTTCATCACCAGGATTAAATAGAAGATTACATAGTGATGAGCATTTTAATAGATTTATAGGAAAAGAAGTTTTTGTTGGATTTAAGAGTTCTTTAAGTGGAAGAAAAAATGTAAAAGGAATTCTTAAAGATGTACAAGAAAATGAAATAATAGTTGAATGTGAAGGGAATGAAATAAAAGTTCCTAAAGATAAAATTAAGACAGCGAACCTTGAAGGGGAGATATAA
PROTEIN sequence
Length: 155
MKKEQLVADLEALCAPIVKEKGYDLYHIEYVKENNEYYLRLYIEKPEERISLRDCEIVSRALSDMLDIEDPIKDAYFLEVSSPGLNRRLHSDEHFNRFIGKEVFVGFKSSLSGRKNVKGILKDVQENEIIVECEGNEIKVPKDKIKTANLEGEI*