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NECEvent2014_4_4_scaffold_1497_2

Organism: NECEvent2014_4_4_Propionibacterium_avidum_HGH0353-rel_64_5_partial

partial RP 32 / 55 MC: 4 BSCG 24 / 51 ASCG 5 / 38
Location: 315..854

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Propionibacterium avidum 44067 RepID=M9VCS4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 179.0
  • Bit_score: 347
  • Evalue 9.90e-93
  • rbh
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 179.0
  • Bit_score: 345
  • Evalue 8.10e-93
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=997355 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibac similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 179.0
  • Bit_score: 345
  • Evalue 4.00e-92

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Taxonomy

Propionibacterium avidum → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 540
GTGGAACAGCAGGCAACAGTGGAGGTTGTCGTCGGTCGGGTGGGACGTGCCCATGGTCTGCGGGGAGACGTCGTCATCGAGGTTCGTACCGACGAGCCCGACGAGAGGTTCGACGTTGGTGCGACAGTTTGCATCGAAGGCACGCGGCGGGAGTTGACAGTTGCCAGATCACGATGGGCCAAGGGCAGCCTGATCGCCGCCTTCAAGGAGGTCGCCGATCGAAATGGCGCCGAGGAGCTGCGAGGTTCGGTGTTGGTGGTTGACGTCGAGGCCGATGAGGAGCCAGCTGATCCAGAAGAGTTCTGGGACCGTCAGTTGCGGGGGCTGGCAGTGGTTGACGAGTCCGGTCAGGCCCGGGGAACCGTCAAGGACATTCTCCACATGCCGGCCCAGGACGTGCTCGTCATCGATGTCGACGGCGACGAACATCTGGTGCCGTTCGTTCGCCAGCTCGTTCCCACCGTTGACGTCGCTGCCGGTCAGATCGTTGTCGCCAGTATCCCTGGACTTCTTGACGACGATGCCGAGGAGGCGAGGTAA
PROTEIN sequence
Length: 180
VEQQATVEVVVGRVGRAHGLRGDVVIEVRTDEPDERFDVGATVCIEGTRRELTVARSRWAKGSLIAAFKEVADRNGAEELRGSVLVVDVEADEEPADPEEFWDRQLRGLAVVDESGQARGTVKDILHMPAQDVLVIDVDGDEHLVPFVRQLVPTVDVAAGQIVVASIPGLLDDDAEEAR*