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NECEvent2014_4_5_scaffold_1072_6

Organism: NECEvent2014_4_5_Veillonella_parvula-rel_38_741_partial

partial RP 31 / 55 MC: 2 BSCG 32 / 51 ASCG 11 / 38 MC: 2
Location: 5936..7096

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=5 Tax=Veillonella RepID=D1BNB8_VEIPT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 386.0
  • Bit_score: 736
  • Evalue 1.30e-209
  • rbh
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 386.0
  • Bit_score: 735
  • Evalue 1.00e-209
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parv similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 386.0
  • Bit_score: 735
  • Evalue 5.10e-209

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1161
GTGGCTAAGAAAGTACAAAAAAGTCAAATAGAGGAGATTGTTGAGCAACTTCTTGAAAAAGGCCGTAAGAGCGGTGTGTTGACACAATCCGAGATTTCAGATGCTCTTCATGAGCAGACGGAAATTACTGCGGAACAATTAGATGATATTTATACGACTTTGGGTAAACTGAATGTTGAGATTGTGGCAGATATTGATGCAGATGATACAGATAGTCATACAATTGAAACAGATGAAGATGAAGACGAAGTTTCTAGTGAGAAGAAAATTTCTATCGATTTAAGTGTTGATTCTGGTGTTAATATCGATGACCCTGTACGAATGTACCTAAAAGAAATTGGTCGCGTACCATTGCTTTCAGCTGACGAAGAAATCGTATTAGCTAAGCAAATCGAAGCTGGTGCACAAGAGGATGCTACATATAAGGATATTCAACTTAGCAAAAAGGCTAAGAAAAAATTGGTAGATGCTAACTTGCGACTAGTTGTAAGTATTGCGAAACGTTATGTAGGTCGCGGTATGTTGTTCTTGGATTTAATCCAAGAAGGTAACTTAGGTCTAATCAAAGCGGTAGATAAATTCGACTATACTAAGGGTTATAAATTTTCTACATATGCTACTTGGTGGATTCGTCAAGCGATTACGCGTGCTATTGCAGACCAAGCTCGTACGATTCGTATTCCTGTACATATGGTAGAAACAATTAATAAATTGATTCGTATTTCTAGACAATTGTTGCAAGACAAGGGTCGTGAGCCATTGCCAGAAGAAATTGCTGAAGGTATGGGAATTACTGTAGAGCGGGTGCGTGAAATTCAGAAAATCGCTCAAGAGCCAGTATCCTTGGAAACTCCGATTGGTGAAGAGGAAGATTCCCATTTAGGGGACTTCATCGAGGACCAAGATGCAATTGCTCCAGACGATGCAGCTAGCTACATTTTATTGCAAGAGCAGATTGAAGATGTATTTACATGCTTGACTGATCGTGAGCAACAAGTCTTGATTTTACGTTTTGGTTTGAAGGATGGTAAGCCTCGTACATTGGAAGAAGTTGGTCAACATTTCAATGTAACAAGAGAACGTATTCGTCAGATTGAAGGTAAAGCGCTTACTAAATTGCGCAATCGCGGTAAACGTGATAAAATCAAAGACTTCTTATAA
PROTEIN sequence
Length: 387
VAKKVQKSQIEEIVEQLLEKGRKSGVLTQSEISDALHEQTEITAEQLDDIYTTLGKLNVEIVADIDADDTDSHTIETDEDEDEVSSEKKISIDLSVDSGVNIDDPVRMYLKEIGRVPLLSADEEIVLAKQIEAGAQEDATYKDIQLSKKAKKKLVDANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVDKFDYTKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRISRQLLQDKGREPLPEEIAEGMGITVERVREIQKIAQEPVSLETPIGEEEDSHLGDFIEDQDAIAPDDAASYILLQEQIEDVFTCLTDREQQVLILRFGLKDGKPRTLEEVGQHFNVTRERIRQIEGKALTKLRNRGKRDKIKDFL*