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NECEvent2014_4_5_scaffold_182_2

Organism: NECEvent2014_4_5_Actinomyces_59_217

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 817..1245

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D62258 related cluster n=1 Tax=unknown RepID=UPI0003D62258 similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 50.0
  • Bit_score: 69
  • Evalue 3.20e-09
TetR family transcriptional regulator {ECO:0000313|EMBL:ETI82799.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense D similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 50.0
  • Bit_score: 69
  • Evalue 4.40e-09
putative TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 60.0
  • Bit_score: 54
  • Evalue 3.30e-05

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGCGCGAAATCATCAGACGCATCGCAGAAGAAGAATTCATTGCGAATGGATACGACGGCACCATAACCCGTCATATCGCGGCTCGCGCCAACTGCGATCCGGCAATGGTGAACTATTATTTCGACTCCAAGCAGCGTTTCCGCTCCTACGTACACTCCAGCATCATCCCCGACATTACTGACTTTATTCATCAGCACGTGTGCGGAACTGACGCTCCTCCCCTGTCATCCGCCACGCGCATAGCGATTGCGCGGGAGATTAAGTGCGTCAAGTCCACGCTGTACGGTGTGGCCACGATGCGCTACATTGTCCAGCTCGAACCTCTCGCATCCATGTCAGAGCAGGCACTTATCGACGAGTTCGCTCCCATCGGGCAGCGCCGCCTGGATACGGTTGTCGAACTGGTTCGCTCGCCACGGAGCCGGTAG
PROTEIN sequence
Length: 143
MREIIRRIAEEEFIANGYDGTITRHIAARANCDPAMVNYYFDSKQRFRSYVHSSIIPDITDFIHQHVCGTDAPPLSSATRIAIAREIKCVKSTLYGVATMRYIVQLEPLASMSEQALIDEFAPIGQRRLDTVVELVRSPRSR*