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NECEvent2014_4_5_scaffold_1579_2

Organism: NECEvent2014_4_5_Actinomyces_59_217

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(742..2259)

Top 3 Functional Annotations

Value Algorithm Source
gamma-aminobutyrate permease n=1 Tax=Varibaculum cambriense RepID=UPI0003B3F097 similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 503.0
  • Bit_score: 837
  • Evalue 8.90e-240
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI82897.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 484.0
  • Bit_score: 831
  • Evalue 6.90e-238
gamma-aminobutyrate permease similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 493.0
  • Bit_score: 651
  • Evalue 1.50e-184

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGTCTGATTCTGCTGCGACGCCAAAAACTGGCAGCCACGGCACAGCCGATCCACACCTTCGACGCAACCTCAAGGCTCGCCATCTCAACATGATCGCCATCGGAGGCGCAATTGGAACGGGCCTGTTCGTCGCATCAGGTGGCACCATCACCGGCGCAGGGCCAGGTGGCGCACTGCTGGCGTACGGCGCAATCGGCGTCATGGTCTTCTTCCTCATGCAGTCACTGGGCGAGATGGCCACATACTGCCCCTCCTCCGGTGCGTTCGAGGTTTACGCGACGCGCTACGTCTCCAAGTCTTTCGGCTTCGCGCAGGGATGGAACTACTGGTACAACTGGGCGATCACGGTGGCAGCCGAACTCGTTGCCGCCACCATCGTCATGCAGTACTGGTTCCCGCCGGATCAGGTTCCACCGTGGATCTGGTCCGCCATCTTCCTGCTGATTCTGTTCACCCTCAACGCGTTCAGTGTGCGCGGTTTTGGTGAATCTGAATTCTGGTTCGCCGCCATCAAAGTCGTGACCGTCTTGATCTTCCTGGCGCTGGGTGTGCTGATGATCGTCGGTATCCTGGGAGGCGAATCGCCCGGCCTGACTAACTGGCAGATTGGCGAGGCGCCCTTCGTCAACGGCTTCTGGGGAATCATGGGGGTCTTCATGATCGCCGGATTCTCATTCCAGGGAACAGAAATGATCGGCATCGCAGCCGGCGAGACTGAAGATCCGGAGAAGAACGTTCCCAGGGCTACGCGAGCGGTCTTTTTCCGCATCCTGCTGTTCTATATCGGCGCGATCCTGGTGATTGCCTTCCTCATCCCCTACACCGACCCGTCGCTGCTGCAGGGCGCAAGTGCAGACGATTCCACCGCACAAGGCTTCACCGAGGCCGTCACAAAGTCACCCTTCACGTTGCTCTTTGAGCGAGCCGGCATCGCCGGTGCTGCAGGTGTAATGAATGCGGTCATTTTGACCTCGATTCTGTCTGCAGGAAACTCCGGTGTCTACGTCGCCACTCGCATGCTCTACTCAATGGCGAAGGAGCGTAAGGCGCCTCGTCTGTTTGGTCGTGTCACCTCACACGGTGTTCCCCTGGCAGCTCTGGCCGCTACGTGCCTGATCGGCGCGGCATGTTTCGCCACATCTCGCGTCGGTTCCGGCGTTGTCTACAGCTGGCTGGTGAACGCATCTGGCCTGGCCGGTTTCATCACGTGGATGGGAATCGCATGGTCGCACTTCTGTTTCCGTCGCGCATATAAGGCTCAGGGGAAGGATCCGAAGGATCTGCCCTACCGCGCTCTGCTCTATCCTGCAGGTCCGCTCATTGCGTTGGCGATGTGTGCGATCGTCGTGGTAGGTCAGTCCCTCGACGTGATTGCCGGCGAATTCTCCGTCATCAAGTTCATCGGTATCTATATCGGGCTGTTCTTCTTCCTCGCCATTTGGGGCGGACATAAACTGGTGACGCGCTCGCGCGCAGTTGACCCGATGAATGCCGACCTGTCGCGGACAGCGCAGTAG
PROTEIN sequence
Length: 506
MSDSAATPKTGSHGTADPHLRRNLKARHLNMIAIGGAIGTGLFVASGGTITGAGPGGALLAYGAIGVMVFFLMQSLGEMATYCPSSGAFEVYATRYVSKSFGFAQGWNYWYNWAITVAAELVAATIVMQYWFPPDQVPPWIWSAIFLLILFTLNAFSVRGFGESEFWFAAIKVVTVLIFLALGVLMIVGILGGESPGLTNWQIGEAPFVNGFWGIMGVFMIAGFSFQGTEMIGIAAGETEDPEKNVPRATRAVFFRILLFYIGAILVIAFLIPYTDPSLLQGASADDSTAQGFTEAVTKSPFTLLFERAGIAGAAGVMNAVILTSILSAGNSGVYVATRMLYSMAKERKAPRLFGRVTSHGVPLAALAATCLIGAACFATSRVGSGVVYSWLVNASGLAGFITWMGIAWSHFCFRRAYKAQGKDPKDLPYRALLYPAGPLIALAMCAIVVVGQSLDVIAGEFSVIKFIGIYIGLFFFLAIWGGHKLVTRSRAVDPMNADLSRTAQ*