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NECEvent2014_4_5_scaffold_212_18

Organism: NECEvent2014_4_5_Clostridium_butyricum_28_20

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(20487..21245)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=4 Tax=Clostridium butyricum RepID=B1QX29_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 252.0
  • Bit_score: 488
  • Evalue 3.90e-135
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 252.0
  • Bit_score: 488
  • Evalue 5.40e-135
sigF; RNA polymerase sigma-F factor SigF similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 252.0
  • Bit_score: 440
  • Evalue 3.40e-121

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Taxonomy

Clostridium sp. IBUN22A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 759
ATGGATAAAGAGAATTTAAAACGAGAGGAATATAACTATGATCAAAATCCAGAACTATTATCACTAGCTAAAAAAGGTGATAATGATGCTATGAATAAGCTTATAGAAATAAATCTTCCCCTTGTAGCATCCATAAGCAAAAAATTTCTAAATAGAGGATATGATTATGAAGATATATTTCAAATTGGTTCTATAGGATTAGTTAAAGCTATAAATAATTTTGATTTAAATTATAATGTGAAATTTTCTACTTATGCAGTTCCAATGATAATGGGAGAAATCAAAAGATTTCTAAGAGATGATGGAATGATTAAAGTAAGTCGTAATGTGAAAAGTCTAGCAAGAAAAATTCACTATTATAGAGAGCAGTTAACAAATAAGCTTAAAAGATCTCCAACAATAGAAGAATTAGCAGAATATGCTGGTGTGGAAAAAGAGGAAATTGTCTTTGCAATTGAATCTGCAAACAGTCTTCAGTATCTTTATGATACTATACATCAAGATGACGGAGCTCCAGTTATGTTAATAGACAAACTTAGTGAAAAAAAGGGTGAAGATGATGTTAATTTAATTGAAAAAATAGCCCTTAAAGAGGCTTTGAGAAGTCTTGATGAAAAAGCAAGGCAGATAATAATGCTCAGATATTTCAAGGATAAAACGCAGATACAAGTTGCAAAAATGCTTGGAATAAGTCAGGTACAAGTATCAAGAATAGAAAAAAAAGTACTACTTCAAATGAAGAAAAAATTAGAAGAATGA
PROTEIN sequence
Length: 253
MDKENLKREEYNYDQNPELLSLAKKGDNDAMNKLIEINLPLVASISKKFLNRGYDYEDIFQIGSIGLVKAINNFDLNYNVKFSTYAVPMIMGEIKRFLRDDGMIKVSRNVKSLARKIHYYREQLTNKLKRSPTIEELAEYAGVEKEEIVFAIESANSLQYLYDTIHQDDGAPVMLIDKLSEKKGEDDVNLIEKIALKEALRSLDEKARQIIMLRYFKDKTQIQVAKMLGISQVQVSRIEKKVLLQMKKKLEE*