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NECEvent2014_4_5_scaffold_2563_2

Organism: NECEvent2014_4_5_Eggerthella_1_3_56FAA-rel_64_5_partial

partial RP 42 / 55 MC: 2 BSCG 38 / 51 ASCG 11 / 38 MC: 2
Location: comp(1240..1722)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WM21_EGGLE similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 160.0
  • Bit_score: 322
  • Evalue 2.30e-85
  • rbh
Sigma-70 region 2 {ECO:0000313|EMBL:EGC90098.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 160.0
  • Bit_score: 322
  • Evalue 4.30e-85
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 160.0
  • Bit_score: 321
  • Evalue 1.90e-85

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Taxonomy

Eggerthella sp. HGA1 → Eggerthella → Eggerthellales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 483
GTGCGATCGGCAGGAGACATCGAGAGGGCGATAGAGCGGCACGGCGATGCGGTATGGCGCGTCGCCGTGCTGTACTTCCACGCTCACGCCGACGCCCAGGATGCCTTTCAGGACGCGTTTTTGAAGTACGCGCTTGCCGATCAGGTGGCGTTCAACGACGACGAGCACTGCAAGGCGTGGCTCATTCGGGTGACCGCCAACGTATGCAAGGATATGCTCAAGGCCGCATCCCGTCGCGCGGTGTCGCTCGACGACGCGGTTTGTGCAACCTCGAACGACCCGGCCACGCAGCCCGCATCGTTCTCCAGCGAGGTGGTGGACGCCATGCGTTCCCTTGACGATCCCCCTCGCACTCCCTTGTATCTTTCTCTGTACGAGGGTTATACCGCTCCGGAGATCGCGCAGATGGTGGATGCTCCCGTGAACACGGTGTACTCGTGGCTCGCGCGAGGCAAGAAGCAATTGCAGGAGGTGTTGTCATGA
PROTEIN sequence
Length: 161
VRSAGDIERAIERHGDAVWRVAVLYFHAHADAQDAFQDAFLKYALADQVAFNDDEHCKAWLIRVTANVCKDMLKAASRRAVSLDDAVCATSNDPATQPASFSSEVVDAMRSLDDPPRTPLYLSLYEGYTAPEIAQMVDAPVNTVYSWLARGKKQLQEVLS*