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NECEvent2014_4_5_scaffold_508_5

Organism: NECEvent2014_4_5_Clostridium_7_2_43FAA-rel_28_9

near complete RP 50 / 55 MC: 5 BSCG 50 / 51 MC: 3 ASCG 16 / 38 MC: 2
Location: 1806..2495

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HE96_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 229.0
  • Bit_score: 437
  • Evalue 7.20e-120
  • rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 229.0
  • Bit_score: 437
  • Evalue 1.00e-119
rplA; ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 229.0
  • Bit_score: 415
  • Evalue 1.10e-113

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 690
ATGGGAAAGAATTATATTGAAAGTGCAAAATTAATAGATAAGAGTGCATTATACACTCCATTTGAAGCTTTAGATTTAGCTGTTAAAACTGCTAAGGCTAAGTTTGATGAAACTATAGAACTACATGTTAGATTAGGGGTTGACCCAAGACATGCAGATCAACAAGTAAGAGGAGCTGTTGTTCTTCCACACGGAACAGGTAGAACTGTAAGAGTTTTAGTGTTTGCTAAGGGAGAAAAAGCTAAGGAAGCTCAAGAAGCTGGAGCAGATTTCGTTGGAGCTGAAGAATTAGTTCAAAAGATTCAAAGCGAAAACTGGTTCGACTACGATGTAGTTGTAGCTACACCAGATATGATGGGTGTTGTTGGTAGAATCGGTAGAGTTTTAGGACCTAAGGGATTAATGCCAAACCCAAAATCAGGTACAGTAACATTTGATGTTGCTAAAGCAATAGCTGATATTAAAGCTGGTAAGGTTGAATATAGAGTTGATAAGACTGCTATCGTTCACTGCCCAATCGGAAAGAAGTCATTTGGAGTAGAAAAGCTTCAAGCTAACTTCAACACTTTAATGGATGCATTAATCAAAGCTAAACCAGCTGCTGCTAAGGGACAATACATTAAATCAGTATCAGTTTCAAGCACAATGGGACCAGGAGCTAAAGTTAACCCAACAAAAGTTTTAGATTAG
PROTEIN sequence
Length: 230
MGKNYIESAKLIDKSALYTPFEALDLAVKTAKAKFDETIELHVRLGVDPRHADQQVRGAVVLPHGTGRTVRVLVFAKGEKAKEAQEAGADFVGAEELVQKIQSENWFDYDVVVATPDMMGVVGRIGRVLGPKGLMPNPKSGTVTFDVAKAIADIKAGKVEYRVDKTAIVHCPIGKKSFGVEKLQANFNTLMDALIKAKPAAAKGQYIKSVSVSSTMGPGAKVNPTKVLD*