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NECEvent2014_4_5_scaffold_508_9

Organism: NECEvent2014_4_5_Clostridium_7_2_43FAA-rel_28_9

near complete RP 50 / 55 MC: 5 BSCG 50 / 51 MC: 3 ASCG 16 / 38 MC: 2
Location: 7692..11225

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 999.99
  • Bit_score: 2223
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 999.99
  • Bit_score: 2086
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H649_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 999.99
  • Bit_score: 2224
  • Evalue 0.0
  • rbh

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3534
TTGTTTGAATTGAATAATTTTGATGCTATACAAATAGGTTTAGCTTCACCAGATCAAATAAGAGAGTGGTCAAGAGGTGAAGTTAAGAAGCCTGAAACCATAAACTATAGAACTCTAAAACCAGAAAGAGATGGTCTATTCTGTGAAAGAATATTTGGACCTATCAAGGACTGGGAATGTCATTGTGGTAAATATAAGAGAGTAAGATATAAGGGCATAGTTTGTGATAGATGTGGAGTTGAAGTAACTAAGGCTAAGGTAAGAAGAGAAAGAATGGGGCATATTGAACTTGCTGCCCCAGTTTCTCACATATGGTACTTCAAAGGAATTCCATCAAGAATGGGATTACTTTTAGATATGTCACCAAGAGCTTTAGAAAAAATACTATACTTTGCTTCATATGTAGTAATTGACCCTAAAGAAACACCATTATTAAAGAAGCAACTTCTAAATGAAAAAGAATATAGAGAAGCTGTAGATAAATATGGTGATGAAAGCTTTGTAGCTGGAATGGGAGCAGAAGCTGTTCAACAATTACTTGGAGAGATTGATTTAGACTCTCAAACAAAAGAGCTTAAAGAAGAATTAAAAGTAAGCACTGGTCAAAAGAAAGTTAGAATTATAAGAAGATTAGAAGTAGTTGAGTCATTTAGAAAATCAGGTAACGATCCAAGATGGATGGTAATAAACGTTATTCCTGTAATTCCACCAGATATTAGACCTATGGTTCAATTAGATGGAGGAAGATTTGCAACTTCTGACTTAAATGATTTATATAGAAGAGTTATTAATAGAAATAACAGATTAAAGAAACTTTTAGACCTAGGAGCACCTGATATCATTGTAAGAAATGAAAAGAGAATGCTTCAAGAAGCGGTTGATGCACTTATTGATAATGGTAGAAGAGGAAGACCAGTTACTGGTCCTGGAAACAGACCACTTAAATCTTTATCAGATATGCTAAAAGGTAAGCAAGGAAGATTTAGACAAAACTTACTTGGTAAGAGAGTTGACTACTCTGGTAGATCAGTTATCGTTGTTGGACCAGAGCTTAAGATGTATCAATGTGGGCTTCCAAAGGAAATGGCTTTAGAATTATTTAAACCATTTGTAATGAAGAAGTTAGTTGAAGATGGAGTTGCTCATAACATAAAGAGTGCTAAGAGAATGGTTGAAAGGGTAAATAATCAAGTATGGGATGTACTTGAAGAAGTTATTACTGACCATCCAGTTCTATTAAACCGTGCACCTACCCTACATAGACTTGGAATTCAAGCATTCCAACCTGTTTTAGTAGAAGGTAGAGCTATTAAATTACATCCACTTGTATGTACTGCTTATAATGCTGACTTCGATGGAGACCAAATGGCGGTTCACGTACCATTATCAGTTGAAGCACAAGCAGAAGCAAGATTCTTAATGCTTGCAGCAGGAAATATAATGAAGCCATCTGATGGTAAACCAGTTTGTGTACCTACTCAAGATATGGTTCTAGGTTCATACTATTTAACAATGGATAAAGAAGGAGCCAAGGGAGAAGGTAAAGCATTCTACTCTAAAGATGAAGCTATAATGGCTTATGAAGTAGGAGAGATTGCTATACATGCTGCTATTAAAGTTAAGATGACTAAAGAGGTAAATGGAGAAGTTAAATCAGGTATAATTAATACTACAGTAGGTAAGCTAATATTTAACGAATCAATTCCTCAAGATTTAGGCTTTGTTAACAGAAATAACAAAGAAGAAGAATTTAATTTAGAAGTTGACTTCTTAATAACTAAGAAGACATTAGGAACTATAATTGATAAATGTTATGCAGTTCACGGACCAACTAATACATCTATAATGCTAGATAAGATCAAAGCATTAGGATATCACTACTCATCTATTGGAGCAGTAACTGTTGCAGCATCTGATATGATAGTACCAGAAGCTAAATATAGATTACTTAAAGAAGCGGATGATACAGTAGAGAAAATCGAAAAGATGTATAAGAGAGGTTTCATTTCTGAAGAAGAAAGATATGAAAGAGTTATAGAAAAATGGACTAAGACAACTGAAGATGTTGCGGATGCACTTATGGATAGCTTGGATAAATTCAATCCAATATTCATGATGGCTGACTCAGGGGCCAGAGGATCTAAGTCTCAAATTAAGCAATTAGCTGGTATGAGAGGACTTATGGCCAGCCCGACTGGTAAGATTATAGAATTACCAATCAGAGCATCATTTAGAGAAGGTCTTGAAGTTTTAGAATACTTCATATCTACACACGGAGCTAGAAAAGGTAATGCCGATACGGCTCTTAAAACAGCTGACTCAGGATACTTAACAAGAAGACTTGTTGACGTATCACAAGATGTTATCGTAAGAGAAGTAGATTGTGGTACTACAGAAGGTATCGTTGTTTCAGAAATAAAAGAAGGAAATGAAGCTATTGAAGGCTTAGCAGAAAGATTATATGGTAGATATACAGCAGAACCAATAGTTCATCCTGAAACTGGTGAAGTAATGGTAGAAGCTGATCAATATATGGAACTAGATGTTGCAGAAAAAGTTGCAGCAGCTGGAGTTAAAAAAGTTAAGATTAGATCTGTATTTACATGTAAATGTAAAGTAGGAGTATGTTCTAAGTGTTATGGTATGAACATGGCAACAGCTCAAAAGATCAATATAGGTGAAGCAGTAGGTATTATTGCAGCTCAATCAATCGGAGAACCGGGAACTCAGCTTACAATGAGAACCTTCCATACAGGGGGAGTAGTTGGAGCCGATATTACACAAGGTCTTCCAAGAGTTGAAGAGTTATTTGAAGCAAGAAAACCTAAAGGTTTAGCTATAGTAAGTGAAATTACAGGTTCTGTTAAGGTTGAAGAAACTAAGAAAAAGAGAACTGTAATTGTAATGGCTGAAGATGGAGAAGAACGTAGTTATGAAATTCCGTTTGGTTCAAGATTAAAGGTATCAGATGGTGACTTTATAGAAGCTGGGGATGAAGTAACAGAAGGTTCAGTAAATCCACATGATATAGCAGCTATAAAAGGTATTGATGGAGCAAGAAAATACTTATTATCAGAAGTTCAAAAAGTTTATAGATTACAAGGTGTTGATATCAATGATAAGCACTTAGAAGTAGTTGTTAGACAAATGACTAGAAAGGTAAAAGTATCAGACTCTGGAGATACTGATTTACTACCAGGTACAATGATTGATGTATTCGACTTTATTGAAGAAAATGAAAGAGTAAGAGAATTTGGTGGAGAAGAAGCGAAGGGAGAGCAAGCATTATTAGGTATTACTAAAGCAGCTCTTGCAACTGATAGTTTCTTATCAGCAGCATCCTTCCAGGAAACTACTAGAGTTCTTACAGAAGCAGCAATTAAAGGTAAGATAGATCCATTGGTAGGATTAAAAGAAAATGTTATTATTGGTAAGTTAATACCAGCAGGTACTGGAATGATGAAATACAGAAACGTAAAGCTAGATGTAGAGGAGCTTCCAGTAGAAAATGAAGTAGTAGAAACTATTGAATAA
PROTEIN sequence
Length: 1178
LFELNNFDAIQIGLASPDQIREWSRGEVKKPETINYRTLKPERDGLFCERIFGPIKDWECHCGKYKRVRYKGIVCDRCGVEVTKAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDMSPRALEKILYFASYVVIDPKETPLLKKQLLNEKEYREAVDKYGDESFVAGMGAEAVQQLLGEIDLDSQTKELKEELKVSTGQKKVRIIRRLEVVESFRKSGNDPRWMVINVIPVIPPDIRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKKLVEDGVAHNIKSAKRMVERVNNQVWDVLEEVITDHPVLLNRAPTLHRLGIQAFQPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLAAGNIMKPSDGKPVCVPTQDMVLGSYYLTMDKEGAKGEGKAFYSKDEAIMAYEVGEIAIHAAIKVKMTKEVNGEVKSGIINTTVGKLIFNESIPQDLGFVNRNNKEEEFNLEVDFLITKKTLGTIIDKCYAVHGPTNTSIMLDKIKALGYHYSSIGAVTVAASDMIVPEAKYRLLKEADDTVEKIEKMYKRGFISEEERYERVIEKWTKTTEDVADALMDSLDKFNPIFMMADSGARGSKSQIKQLAGMRGLMASPTGKIIELPIRASFREGLEVLEYFISTHGARKGNADTALKTADSGYLTRRLVDVSQDVIVREVDCGTTEGIVVSEIKEGNEAIEGLAERLYGRYTAEPIVHPETGEVMVEADQYMELDVAEKVAAAGVKKVKIRSVFTCKCKVGVCSKCYGMNMATAQKINIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVVGADITQGLPRVEELFEARKPKGLAIVSEITGSVKVEETKKKRTVIVMAEDGEERSYEIPFGSRLKVSDGDFIEAGDEVTEGSVNPHDIAAIKGIDGARKYLLSEVQKVYRLQGVDINDKHLEVVVRQMTRKVKVSDSGDTDLLPGTMIDVFDFIEENERVREFGGEEAKGEQALLGITKAALATDSFLSAASFQETTRVLTEAAIKGKIDPLVGLKENVIIGKLIPAGTGMMKYRNVKLDVEELPVENEVVETIE*