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NECEvent2014_4_5_scaffold_72_29

Organism: NECEvent2014_4_5_Anaerococcus_vaginalis_rel_28_14

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(29487..30386)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococ similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 299.0
  • Bit_score: 599
  • Evalue 3.40e-168
RluA family pseudouridine synthase (EC:3.2.1.17) similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 299.0
  • Bit_score: 430
  • Evalue 4.20e-118
Pseudouridine synthase n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HSR6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 299.0
  • Bit_score: 599
  • Evalue 2.40e-168
  • rbh

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Taxonomy

Anaerococcus vaginalis → Anaerococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 900
ATGAAAATTAAAGCAAATAAAGAAATTAGAATTGATAAATATCTTTCTGATCTTTTTGAAGAAATTCCAAGAGAAAAGGTAAAAGATTTTATCAAAGACGAAAAAATAAAAATAAATAACAAAAAAATAAAACCTTCCTACAAATTGATTTTAGAAGATGAAATAGAAATTTCTGACAAATTATTTGAAAAAGAAAAAATCGAAGCTGAAAAAATGAATTTAAAAATCATTTATGAAAATGAAGACTATGCAATTATTGATAAGGATGAAAATGTAATTGTCCATCCAGCAGGATCAATTGTAAGTGGAACTTTGGTTAATGGTCTTTTGGATTATTTTGGCTATAATAATTTATCACATATCGGAGGCGATGACAGACCAGGAATTGTTCACAGACTTGATAAGGATACAACAGGTCTTATGGTAATTGCAAAAAATAATTCATCTTACAAATATTTGAAAAATCTTTTTGAAACAAGAAAAATTGACAAGGAATATTTGGCAATTTGCAATGGGATTTTTCAAAAAAAATCTGGAACTATTCAAACTTTTATGGATCGTGATCCAAATAATCGCAGAAAAATGGCAGTAACAAATTCTGGCCGTGATGCAATTAGTAAGTATGAAGTTATTTCAGAAAATAATGGATATTCCTTGGTAAAAATAAAAATCTTAACAGGAAGAACTCACCAAATTAGGGTTCACATGACCTATATTAATCATCCACTTTTGGGAGATCCTGTTTATGGAAATGTAAAACACAAATTTAATTTAGACCATCAACTACTTCATTGTCACAAATTAGGATTTACTGATAAAAATGGAATTTACAAAGAATTTTGTGCAGAAGTTCATGAAGATTTTAAAAAATATCAAAAAATTTTGGGTTTAGGAGAATAA
PROTEIN sequence
Length: 300
MKIKANKEIRIDKYLSDLFEEIPREKVKDFIKDEKIKINNKKIKPSYKLILEDEIEISDKLFEKEKIEAEKMNLKIIYENEDYAIIDKDENVIVHPAGSIVSGTLVNGLLDYFGYNNLSHIGGDDRPGIVHRLDKDTTGLMVIAKNNSSYKYLKNLFETRKIDKEYLAICNGIFQKKSGTIQTFMDRDPNNRRKMAVTNSGRDAISKYEVISENNGYSLVKIKILTGRTHQIRVHMTYINHPLLGDPVYGNVKHKFNLDHQLLHCHKLGFTDKNGIYKEFCAEVHEDFKKYQKILGLGE*