ggKbase home page

NECEvent2014_4_5_scaffold_96_19

Organism: NECEvent2014_4_5_Anaerococcus_vaginalis_rel_28_14

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(30877..31833)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 318.0
  • Bit_score: 614
  • Evalue 1.10e-172
DNA-directed RNA polymerase subunit alpha n=1 Tax=Anaerococcus obesiensis RepID=UPI000313353F similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 318.0
  • Bit_score: 624
  • Evalue 5.70e-176
  • rbh
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 318.0
  • Bit_score: 515
  • Evalue 8.10e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Anaerococcus vaginalis → Anaerococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 957
ATGATAGAAAAATTAGATACAAAGATTGAAATTTTAGATATAGACGAAGAAACTAATTACGGTAAATTTGTCCTATATCCACTCGAAAGAGGCTATGGTACAACCATAGGAAACAGTATGAGAAGGATGCTTTTATCATCCTTACCTGGTTCTAGCGTCTCAAAGATTCTTATAGACGGGGTACTACACGAATTTTCCACAATTCCTGGAGTTGTAGAAGATGTACCTGAATTAATATTAAATATCAAAGGTATTGATATTAAAAAACATACTAAAGAAGATCTAACACTATTTTTAGATATAGAAGGACCTAAAATTGTTACAGCTAAAGATATAAAAACAGATGCCCAAATCGAAGTGGCAAATCCAGATCATTATCTTGCAACAGTTAATGATAAAGGAAGATTGTTTATTGCCCTTGACGTTACAGATGGTAAAGGATATAGGGTAGCTGAACAAAATAAAAAGGATACTGACCCAATAGGAGCAATAGCTATAGATTCATCATTTACACCAGTAAAAAGCGTAAACTTTACAGTTGAAAATACTAGAGTAGGTGAGTCTACTGATTATGATAAATTAATTCTTGAAGTGTGGACAGATGGAACAATTACTCCACAAGAAGCCTTATCAGAAGGCGCTTCAATTTTGATGGAAGATATAAGATTTTTCAAAGACCTACCAGGTCAACAATTCCCACCAGAAGATGAGGAAGAAGAAATTGAAGAAATCGAAGAAGAAGATAATAATCAAATGGAATTATCAAAAACTATTGAGGAATTAGATCTTTCATTAAGATCATTCAATTGTCTAAAAAGAGCAGGATATAATACTGTTGGTGAGATAATAGAAAAAAGTGAATCTGAGCTAAAGGATATCAAAAACTTCGGTAAAAAATCACTAGAAGAAGTTATTGATAAAATCCACAGTTTAGGACTTAGTTTAAGAGAAGAATAG
PROTEIN sequence
Length: 319
MIEKLDTKIEILDIDEETNYGKFVLYPLERGYGTTIGNSMRRMLLSSLPGSSVSKILIDGVLHEFSTIPGVVEDVPELILNIKGIDIKKHTKEDLTLFLDIEGPKIVTAKDIKTDAQIEVANPDHYLATVNDKGRLFIALDVTDGKGYRVAEQNKKDTDPIGAIAIDSSFTPVKSVNFTVENTRVGESTDYDKLILEVWTDGTITPQEALSEGASILMEDIRFFKDLPGQQFPPEDEEEEIEEIEEEDNNQMELSKTIEELDLSLRSFNCLKRAGYNTVGEIIEKSESELKDIKNFGKKSLEEVIDKIHSLGLSLREE*