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NECEvent2014_4_5_scaffold_84_27

Organism: NECEvent2014_4_5_Veillonella_parvula-rel_38_17_partial

partial RP 6 / 55 MC: 1 BSCG 6 / 51 MC: 2 ASCG 6 / 38 MC: 1
Location: comp(29617..31947)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=936588 species="Bacteria; Firmicutes; Negativi similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 779.0
  • Bit_score: 1470
  • Evalue 0.0
Ribonuclease R n=1 Tax=Veillonella sp. ACP1 RepID=J4QDB0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 779.0
  • Bit_score: 1470
  • Evalue 0.0
  • rbh
ribonuclease R similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 758.0
  • Bit_score: 1104
  • Evalue 0.0

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Taxonomy

Veillonella sp. ACP1 → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2331
ATGAAGGAAAAGGTGTTAGCTTTTTATAAATCTATTTATCCCCATACATATCATATAGAGGATGCGGCTATGGATTGTCATATTAAGGGCGGTCGTGAATTAGATGCCTTTATGGATGTGGCTAAAGAGCTATTAAAAGAAGGCTGTCTAAGCTTTATCCGTAGAGATGTGTATGCGTTTAATAACGATACAGAAATCATTGAAGGCATTTACAAGGGGTATAGAAAATCTTTTGGCTTTGTTATAACGGCACCTAATGAAGAAGATGTATATATAGCTGAACAAAATAAGGGAACTGCTATGCACAATGATAAGGTTAGGGTACGCATTGTTGCATCTAGTGATTCACACCATAAACGTGAAGGCGTAGTGACTGAAGTCATAGAACGGGCTAATGAAACCGTTGTAGGCACCTATGATAGACAACAGTTTTTTGGGTTTGTTATACCTGATGATGAACGTTTAGGTACCGATGTATATGTAGATTTACAGAATACATTAGATGCTCGAAGTGGTGCTAAAGTTCTTGTAAAGATTATAAAATGGCCTGAAGGAAACAAAAAGCCAGAAGGTATTATTACAGAGGTCTTAGGCTACAAGGGTGATGTTGGTCTTGATATTAACTGCATTATGGCTAACTATAGTTTGCCGTTCTCTTTTCCAGACGAGGTTGTAAAAGCTAGTAAAAATATAGATTTAACGATATCTGAAGACCCTAAACGTTGGGATTTACGAGATGTGCCAATGGTAACCATCGATGGAGAAGACGCTAAGGACCTTGATGATGCCGTAAGTGGTCGTAAACTCGATAATGGTAACTATGAACTAGGTGTACATATTGCCGATGTAAGCCATTATGTAGTGTCACAAAAGGCTATCGATAGAGAGGCCTATAAACGCGGTACATCTGTCTATCTAGTAGACAGAGTTATCCCCATGTTACCAGAGGTACTATCCAATGGTATCTGTAGCTTAAACGCTGGTGAAGACCGGTATGCTATGACCTGCATGATGGAAATCGATACAAATGGTAAGGTTGTTAATTATCGGATTCAACCATCTATCATCCATGTGAATCGCCGTTGCAGTTATAAAGAGATTTATAAAGCATTAACCGAAGATATTATTCCTGATGACTTGGCACCTCTTATGCCGATGATTCACAATTTATCCGACATCGCAAAAACTTTAAATGATATGCGCCGTCGTCGTGGTGCATTGGATTTTGATTTCCCTGAATATAAGGTGCTTTTAGATACAGAAGGCACACCATTGCGCATTGTACGTCGCGACCGGACATTAGCAGAACGACTTATTGAAGAATGTATGCTTATAGCTAATGAAACGGTAGCTACTCATCTAAAGAATACAAACCGTACGAGTGTATATCGTATCCATGAAACACCGAGCGAAGAAAAGATGAGTATGTATCAAAAGGTACTCAATTATTTAGGTCAAGATATTCGATTGCGACTCGATGAATTGGAACCTCGTGTGTTCCAACAAATTCTCGATGCTGTTAAGGGAACTGATGTTGAACAAGTAGCACAAATCATGACATTGCGTTCCATGCAACAAGCTAAATATAGCATAGATAATGCAGGTCATTTTGGGTTGGCTTCGAAATGCTACACACACTTTACATCGCCTATTAGAAGATATCCAGATCTCATGGTACATCGCTTATTAAAAGCTGATATGGGATGGCCTGATGGATATGCAAACCGCGATACTAAAACAGAATTTTTAGAACGTGCTGCTGTGCATTCTTCAGAACGTGAACAAGTGGCTGTAGCTGCTGAGCGCGACACAGTCGATTTAAAGAAAACCCAATACATGGTTCCATTTATTGGCGAAGTCTTTGAAGGCAAGATTTCTAGCATTACGTCCTTTGGAATGTTCGTAGAACTAGATAATGGTATAGATGGACTTGTCCATATGAACATGATGACTGATGATTACTATTTTTACGATGAAGAGCATTTCTTGCTCGTCGGTAAACGTACTGGTCAAATCTATCATTTGGGTGATACCGTAACGGTTACACTGGTGAAAGCCGATGTAGAAAAGCGTCAAATCGACTTTGTTCTAGGCGAAGTAGACAATCTCATGAGAATTCAGGAAATAATGAAAAATTCTGAAGGCTATGTAGGTGCTAGGGAAAAGAAACCATTTGGGCGTTCTGGTATTTCAAAGCAATTAAAACGAAGAGGCAAGGGCCAAAGTAAATCTTCAAAAACTAGAGATAAACGTTCTAACACATCTGGTCCGAAAAAATCTAAAAAGGGTCGTAAAGATTCTAAGAAGAAAGTAAAAAAACGTAAACGATAA
PROTEIN sequence
Length: 777
MKEKVLAFYKSIYPHTYHIEDAAMDCHIKGGRELDAFMDVAKELLKEGCLSFIRRDVYAFNNDTEIIEGIYKGYRKSFGFVITAPNEEDVYIAEQNKGTAMHNDKVRVRIVASSDSHHKREGVVTEVIERANETVVGTYDRQQFFGFVIPDDERLGTDVYVDLQNTLDARSGAKVLVKIIKWPEGNKKPEGIITEVLGYKGDVGLDINCIMANYSLPFSFPDEVVKASKNIDLTISEDPKRWDLRDVPMVTIDGEDAKDLDDAVSGRKLDNGNYELGVHIADVSHYVVSQKAIDREAYKRGTSVYLVDRVIPMLPEVLSNGICSLNAGEDRYAMTCMMEIDTNGKVVNYRIQPSIIHVNRRCSYKEIYKALTEDIIPDDLAPLMPMIHNLSDIAKTLNDMRRRRGALDFDFPEYKVLLDTEGTPLRIVRRDRTLAERLIEECMLIANETVATHLKNTNRTSVYRIHETPSEEKMSMYQKVLNYLGQDIRLRLDELEPRVFQQILDAVKGTDVEQVAQIMTLRSMQQAKYSIDNAGHFGLASKCYTHFTSPIRRYPDLMVHRLLKADMGWPDGYANRDTKTEFLERAAVHSSEREQVAVAAERDTVDLKKTQYMVPFIGEVFEGKISSITSFGMFVELDNGIDGLVHMNMMTDDYYFYDEEHFLLVGKRTGQIYHLGDTVTVTLVKADVEKRQIDFVLGEVDNLMRIQEIMKNSEGYVGAREKKPFGRSGISKQLKRRGKGQSKSSKTRDKRSNTSGPKKSKKGRKDSKKKVKKRKR*