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NECEvent2014_4_5_scaffold_201_4

Organism: NECEvent2014_4_5_Veillonella_parvula-rel_38_17_partial

partial RP 6 / 55 MC: 1 BSCG 6 / 51 MC: 2 ASCG 6 / 38 MC: 1
Location: comp(2946..3857)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate binding domain protein n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L813_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 303.0
  • Bit_score: 587
  • Evalue 5.70e-165
  • rbh
LysR substrate binding domain protein {ECO:0000313|EMBL:EFL55522.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella aty similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 303.0
  • Bit_score: 587
  • Evalue 7.90e-165
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 303.0
  • Bit_score: 548
  • Evalue 1.10e-153

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Taxonomy

Veillonella atypica → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 912
ATGGATGATAAAGAATGGCGTACCTTTGTAACCGTTGTGGATGAAGGTAATATAACAAAGGCTGCTGAAAAACTATTTCTTTCGCAGCCGGCTTTGAGCTATCGACTGCGTCATTTAGAGGATAGCGTAGGGTACTCCTTGCTGCTTCGTACCACAGAAGGTATTACATTAACACCGCAAGGCGAGATTTACTATGACTATTGTAAACGTATGTTGCATGATAGAGAATCTTTAGAACATGCGTTAATATCCTCTACTGGTAAGATTCAAGGGACATTAAAAATTGCATCGTCTATCAATTTTGCGGACTATGAATTGCCGCAATTATTGCAGTCCTTTAGAGAACAATATCCAGATGTGCACATACAGGTGAAAACAGCTTTTAGTCATCAGGTAGTGAAGATGTTTAATACTGGTGACTGTATGGTTGCCTTTGCGCGCGGCGGCTATGAAGTATCCGGTACCTCGGAATTACTATTAGAAGAACCATATTGCTTGGTATACAAAGAGCTTGTACCACCAGAATCGTTAGAAAAAGTACCTTTCATTAGGTACCAAACAGATGCATCGGTTTCAAATATTATTGAAAACTGGTGTGCCGAGCATTTTGAAGAACCTCCTATTGTGGCCATGGACGTCAATTCTATGAGTACGTGCCGTCACTTTGTGCGGGCCGGTCTTGGGTGGTCTATTTTGACCTATATGGGACTTGGATCCTGTAAGGATAAAGACATTTATGTAAGTCCATTGCGCAGTAAGGACGGCAATTATATTACGCGCGATACCAATATGGTGTACGCCAAAGATGCTACGAATCTGATTGCGGTAAAAACATTTATAGAATATGTACGTAATTACTATAAAGAACATACCGTAGTGGATGATAGTATTTTTAGAGAATATAAAGCATAA
PROTEIN sequence
Length: 304
MDDKEWRTFVTVVDEGNITKAAEKLFLSQPALSYRLRHLEDSVGYSLLLRTTEGITLTPQGEIYYDYCKRMLHDRESLEHALISSTGKIQGTLKIASSINFADYELPQLLQSFREQYPDVHIQVKTAFSHQVVKMFNTGDCMVAFARGGYEVSGTSELLLEEPYCLVYKELVPPESLEKVPFIRYQTDASVSNIIENWCAEHFEEPPIVAMDVNSMSTCRHFVRAGLGWSILTYMGLGSCKDKDIYVSPLRSKDGNYITRDTNMVYAKDATNLIAVKTFIEYVRNYYKEHTVVDDSIFREYKA*