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NECEvent2014_4_4_scaffold_239_16

Organism: NECEvent2014_4_4_Enterobacteriales_plasmid_50_12

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(12487..13044)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Pantoea sp. AS-PWVM4 RepID=U2MX33_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 171.0
  • Bit_score: 244
  • Evalue 9.40e-62
Genome assembly 8917 {ECO:0000313|EMBL:CEP30383.1}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variico similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 171.0
  • Bit_score: 343
  • Evalue 2.10e-91
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 165.0
  • Bit_score: 175
  • Evalue 2.00e-41

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Taxonomy

Klebsiella variicola → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
GTGTATTTCAGTACTTTTCTTTACCTCCTGGGACTCGATCTTATGGCCGATAAAGGCAAGGATCTCGCAGCGTTATATCTTTCCGAACGTAAACGTCTGGAGCGCCAGATAGACCGCAAAGTGGGCTGTCACAGCACGGCCAGTGATCTGGTGCAGGATATTTTTCTGCGGTTGTGGGAAAAAGCTATCGAGTGGAAAGGAGATTCAGCTGCTTATTTAAGCCGCTGCGCGCGAAACGCCGCAATCGATCATCTGCGTGCCGAGAAAACCCGCGAAGAGTATTTGAAGAGCGAGCTGCCAGACCCTTTTTACGCGACTCCCCTGTCACCACAGGAGATCCTCACAGCTGAGCAGAATTTCCGCCATATCGAAGAGGTACTGGCCTGTTTGCCGGAAAAAACACGCCATATATTTCTTCTAAACAGGGTGTATGGGCGCAGTTTTTCTGAAATTGCAGGTGTGATGGGGATATCTCCGCGTGCGGTCGCAAAGCATATGGCACGTGCGGTTTCCTTATGTGAAGACGCATCCGCGAATGGAGTGAAAAATGCCGATTAA
PROTEIN sequence
Length: 186
VYFSTFLYLLGLDLMADKGKDLAALYLSERKRLERQIDRKVGCHSTASDLVQDIFLRLWEKAIEWKGDSAAYLSRCARNAAIDHLRAEKTREEYLKSELPDPFYATPLSPQEILTAEQNFRHIEEVLACLPEKTRHIFLLNRVYGRSFSEIAGVMGISPRAVAKHMARAVSLCEDASANGVKNAD*