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NECEvent2014_4_6_scaffold_2264_1

Organism: NECEvent2014_4_6_Anaerococcus_vaginalis-rel_30_6

near complete RP 44 / 55 MC: 4 BSCG 41 / 51 ASCG 12 / 38
Location: 1..1638

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HUH1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 545.0
  • Bit_score: 1054
  • Evalue 0.0
  • rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus vagina similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 545.0
  • Bit_score: 1054
  • Evalue 0.0
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 545.0
  • Bit_score: 699
  • Evalue 6.80e-199

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Taxonomy

Anaerococcus vaginalis → Anaerococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1638
AGAACTGTTTTGGACGAAGATGAAGATGACGAAGAAATCAGAGAAGATCTTGATAATGATGACGATGAAGATTTTTCAGATGAAAAACTTGAAGATCACATGAAAAAAGTTTCTAACAAGCAAAAGTTAGAAAAAAAGTTTATACAAGATGAAGCTATCACTGGTATAAAGTTGGATGACCCTGTAAAAATGTATTTAAAAGAAATTGGAAAAGTTAAGCTATTAGATGCTCACGAAGAAATATTTTTGGCGAAAAAAATGGAGCTTGGAGATATTGCTTTCAGGAGCAAAAGTGGCAAAAAACTTACCAAACAAAATAAAGTAAAACTTGCTTTAGATATTTTTTATGGAGATCTTTCATTAACTATACTTGGTGCAAATCAATCGATTTTAGAAAATAAAGAATTTGATGATGAAACAAAAACAAATCTTGAGTCATTGATTGAAATTGGAAATCAATTTGAAAATATGTTAAACCAAGAATTAACAGATGAACAATTGGAAGCCATAAAATCTAAAATATTAATTTGCAATATTGCACAAAAATCTATAGCTGACAAAGAATTAAGCGAAAAAGAAGCAAATATTTTGTGTGATTTATTTGATAATTTTGGGAAATTAGTTGCAACAAAAGAATCTGACGATATAGTTTCACTAATTTATTTGGCTTTTTCAGACCTTTACAAAAAGGGAGCTGAAAATGAAATTTTGAAAACCAATGATAAGCTAATAATTAGTGATTTAATAAATTTTTCAAACAAAGCCAGGCAAGTTTATGAATATAAGCCACTTTCAGAATCAAGTATAAAAGATTTGGAAAGATTTACAAAAACCAAAAATCTGTGCAAGAAAATTTTTGAAGATCAAGGATTTGATGCAGACGATGTAAAAAGATTAAATAGGGCAATATTTGATGCAAATAGGGCAAAACAAAAATTAGCAGAGACAAATTTAAGGCTTGTTGTATCAATTGCAAAAAAATATGTAGGTCGTGGAATGAGCTTTTTGGATTTGATTCAAGAAGGAAATATGGGACTTATGAAAGCAGTTGATAAGTATGATTACAATAGAGGATTTAAATTTTCAACTTATGCAACTTGGTGGATAAGACAAGCGATAACTCGTGCTATTGCCGACCAAGCTAGAACAATTAGAATTCCTGTTCACATGGTTGAAACAATAAATAAATTAGTTAGAATTCAAAGACAATTAGTTCAAGATTTAGGTCGTGATCCATCAAACGAAGAAATTGCTGAGCAAATGGGAATTGAAGTTGAAAAAGTTCAAGAGATAAGAAAAATTGCCCAAGAACCTGTTAGTTTGGAAACGCCAATAGGCGAAGAAGAAGACAGCCATTTGGGAGATTTTATAGAAGATGATACAGCTATAAATCCTGATGATGCAGCAAATTATTCAATGCTTAGAGATCAACTAAATGATGTTTTATCTTGTCTTGGAGCAAGAGAAAAAAGAGTTTTACAATTAAGATTTGGACTTATAGATGGAACTCCAAGAACATTAGAAGAAGTTGGCAAAGAATTTGATGTAACTCGCGAGAGAATTAGACAAATAGAAGCAAAGGCACTTAGAAAATTAAAATCGCCTAATAAGAGTGAATTATTGAAAGACTTTTTATAA
PROTEIN sequence
Length: 546
RTVLDEDEDDEEIREDLDNDDDEDFSDEKLEDHMKKVSNKQKLEKKFIQDEAITGIKLDDPVKMYLKEIGKVKLLDAHEEIFLAKKMELGDIAFRSKSGKKLTKQNKVKLALDIFYGDLSLTILGANQSILENKEFDDETKTNLESLIEIGNQFENMLNQELTDEQLEAIKSKILICNIAQKSIADKELSEKEANILCDLFDNFGKLVATKESDDIVSLIYLAFSDLYKKGAENEILKTNDKLIISDLINFSNKARQVYEYKPLSESSIKDLERFTKTKNLCKKIFEDQGFDADDVKRLNRAIFDANRAKQKLAETNLRLVVSIAKKYVGRGMSFLDLIQEGNMGLMKAVDKYDYNRGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVRIQRQLVQDLGRDPSNEEIAEQMGIEVEKVQEIRKIAQEPVSLETPIGEEEDSHLGDFIEDDTAINPDDAANYSMLRDQLNDVLSCLGAREKRVLQLRFGLIDGTPRTLEEVGKEFDVTRERIRQIEAKALRKLKSPNKSELLKDFL*